Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1886 ATGGATTACGAGACTGGTGCACTGAGAGGGAGGGAGTCACAATTTATTTGCCCCACTGATGAAAAATCTGCAGGATCCTCCCTAACGCCCACTCACGGTCGTGTTGAGAAGAAGTGGAAGAGGCAAATAATGGAGAGCTTCTTGAAGGATTTCGAGTTAGAGCCCAAGAATCCATCCACCGAAGCCATGCTCAGATGGAGATCCGCCGTCAGATTGGTCAAGAACCCTCGCAGACGCTTCCGTATGGTCGCCGATCTCGACAAACGTTCCGAAGCCGAGAAGATGAAGCAGAAAATCCAGGAAACGATTCGGATTGCTCTTTATGTTCAAAAGGCGGCATTGCAGTTTATTGACGCTGGAGGTCGAGTTGATTACACTCTATCTGATGAGGCAAGAGAAGCTGGTTTTGGTATTAATCCAGATGACATTGCCTCCATTGTACGTAGCCATGATTATAAGAAATTGAGAATGATTGGAGGAGCTGAAGGGGTTGCATCAAAATTGTCTGTCTCCTCCATGGACAAAGGTGTCAGTGGAAACAGTATAAGTGCAAGGCAACGGATTTATGGTTTCAACCGTTATACAGAAAAACCTAATAGAACCTTCCTGATGTTTGTGTGGGAAGCATTGCATGACTTAACGCTAATCATTCTTATGGTTTGTGCTTTAGTATCTATAGGTGTGGGGATTGCCACTGAAGGATGGCCAAAGGGCGTGTATGATGGTTTGGGAATCATACTTAGTATTTTCTTGGTGGTCATTGTTACGGCTGTCAGTGACTACAAGCAAGCGCTGCAGTTCAGAGATTTGGACATGGAGAAGAAAAAGATATTTGTTCAGGTAACCAGGGATGGGAAAAGGGAGAAGATATCAATTTATGATCTGGTAGTGGGAGATATTGTGCATTTGTCAACTGGGGATCAAGTTCCAGCTGATGGGATTTTCATATGGGGGTACAACTTGCTGATAGATGAGTCTAGTTTGTCAGGTGAGAGCGAACCAGTAAATGTAAATGAAGAAAAGCCTTTCCTTCTTTCAGGAACAAAAGTGCAAGATGGTCAAGGGAAGATGTTAGTGACAACTGTTGGCATGAGAACTGAATGGGGAAAGTTGATGGAAACCCTAAACGAGGGTGGGGAGGATGAGACCCCATTGCAAGTGAAGTTGAATGGAGTTGCTACACTTATTGGTAAGGTTGGTCTGGCTTTTGCTGTAGTAACATTTCTGGTGTTGATAATAAGGTTTGTGGTGGAAAAAGCACAGCTCGGTGAGCTGACTAATTGGTCTTCAATTGATGCAATGAAGTTGCTGGACTATTTTGCTATTGCTGTTACTATAATAGTTGTTGCCGTTCCTGAAGGATTACCATTGGCTGTAACACTCAGCCTTGCTTTTGCTATGAAAAAATTAATGAATGACAGGGCACTTGTGAGGCATCTTGCAGCCTGTGAGACAATGGGCTCATCCAGTTGCATTTGCACAGATAAGACAGGGACACTGACAACTAATCATATGGTAGTTGATAAAACATGGATATGCGAAAAATCCACGGAAATGAAAGGTAAAGAGAGCGCAGACAAATTGAAAAGGGAAATATCTAAAGAAGTTCTGAGCATCCTTTTCCAAGCTATATTTCAAAATACTTCTGCTGAAGTAGTTAAAAATAAGGATGGAAGTAATACAACATTAGGAACACCAACAGAATCTGCTTTATTGGAATTCGGATTGTTTTTGGGTGGTGATTTTGATGCTCAGCGCAAAGAGTATAAGATTGTTAAGATTGAGCCTTTCAATTCAGTCCGGAAGAAGATGTCTGTCCTTGTGCGTCTTCCTGATAGACGGATACGAGCTTTCTGTAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACAAAATAATTGATGGTGATGGAAATACGGTTGATCTTCCTGAAGATCGTGCAAAGAATGTCTCTGATGTGATCAATGGCTTTGCCTCTGAAGCTTTAAGAACTCTTTGTTTGGCTTTCAAAGATTTTGATGATCGCCAAGGGGAGACTAGTATTCCTGATGATGGCTATACACTAATAGCTGTAGTAGGAATCAAGGATCCTGTACGTCCTGGGGTTAAAGAAGCTGTTCAAACTTGTTTAGCAGCAGGAATTACAGTTCGTATGGTCACTGGTGACAATATAAATACAGCTAGGGCTATAGCTAAAGAATGTGGTATATTTACTGAAGGTGGTGTTGCCATTGAAGGACCAGAATTTCGAAACCTGTCTACTGAGCAAATGAAGGATATTATACCAAGAATTCAGGTAATGGCGCGATCCTTACCGCTTGACAAGCATACCTTAGTTACAAATTTGCGGAATATGTTTGGTGAGGTTGTTGCTGTTACAGGCGACGGAACCAATGATGCTCCTGCACTGCATGAGTCTGACATTGGACTTGCCATGGGCATAGCTGGGACTGAGGTTGCTAAAGAAAATGCTGATGTCATCATAATGGATGATAACTTCTCAACTATTGTCAATGTGGCTAGATGGGGACGAGCAGTATACATAAATATTCAGAAATTTGTACAATTTCAGTTAACAGTCAATGTGGTCGCTCTGGTGATCAACTTCGTTTCTGCATGCTTCACAGGATCTGCTCCTTTAACAGCTGTACAATTGCTTTGGGTGAACTTGATTATGGACACTCTGGGTGCATTGGCCCTGGCCACAGAACCTCCTAATGATGAGCTCATGAAAAGGCCTCCTGTTAGTAGAGGAGCAAGCTTTATCACCAAAGCCATGTGGAGAAATATCATCGGCCAAAGTATATATCAACTAGTTGTCCTTGCAGTTCTCAATTTTGATGGCAAGAACCTTCTGAGACTCAATGGCCCAGATGCAACCATTGTCCTAAACACGTTGATATTCAACTCCTTTGTCTTTTGCCAGGTTTTCAATGAGATCAATAGCCGAGACATTGAGAAGATAAACATATTGAAAGGCATGTTTGGCAGTTGGATATTTTTAGCAGTAATATTTTCCACAGTGGCATTTCAAGCGATCATTGTTGAGTTCTTGGGAACATTTGCCAGCACTGTGCCTCTGAACTGGCAACTATGGGTACTGAGTGTGTTAATTGGGGCAGTAAGCTTACCCATAGGGGCTATCCTCAAGTGCATTCCAGTTCAAAGAGATGCTCCAAAACACCACGATGGCTATGACGCATTGCCTTCTGGTCCAGGCATGGCCTAA 3231 0.4246 MDYETGALRGRESQFICPTDEKSAGSSLTPTHGRVEKKWKRQIMESFLKDFELEPKNPSTEAMLRWRSAVRLVKNPRRRFRMVADLDKRSEAEKMKQKIQETIRIALYVQKAALQFIDAGGRVDYTLSDEAREAGFGINPDDIASIVRSHDYKKLRMIGGAEGVASKLSVSSMDKGVSGNSISARQRIYGFNRYTEKPNRTFLMFVWEALHDLTLIILMVCALVSIGVGIATEGWPKGVYDGLGIILSIFLVVIVTAVSDYKQALQFRDLDMEKKKIFVQVTRDGKREKISIYDLVVGDIVHLSTGDQVPADGIFIWGYNLLIDESSLSGESEPVNVNEEKPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGEDETPLQVKLNGVATLIGKVGLAFAVVTFLVLIIRFVVEKAQLGELTNWSSIDAMKLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDRALVRHLAACETMGSSSCICTDKTGTLTTNHMVVDKTWICEKSTEMKGKESADKLKREISKEVLSILFQAIFQNTSAEVVKNKDGSNTTLGTPTESALLEFGLFLGGDFDAQRKEYKIVKIEPFNSVRKKMSVLVRLPDRRIRAFCKGASEIILRMCDKIIDGDGNTVDLPEDRAKNVSDVINGFASEALRTLCLAFKDFDDRQGETSIPDDGYTLIAVVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTARAIAKECGIFTEGGVAIEGPEFRNLSTEQMKDIIPRIQVMARSLPLDKHTLVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAVYINIQKFVQFQLTVNVVALVINFVSACFTGSAPLTAVQLLWVNLIMDTLGALALATEPPNDELMKRPPVSRGASFITKAMWRNIIGQSIYQLVVLAVLNFDGKNLLRLNGPDATIVLNTLIFNSFVFCQVFNEINSRDIEKINILKGMFGSWIFLAVIFSTVAFQAIIVEFLGTFASTVPLNWQLWVLSVLIGAVSLPIGAILKCIPVQRDAPKHHDGYDALPSGPGMA 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1886 1076 Pfam Cation transport ATPase (P-type) 547 633 - -
Mibi06g1886 1076 Gene3D - 175 376 - -
Mibi06g1886 1076 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 703 IPR023299 GO:0000166
Mibi06g1886 1076 Pfam Cation transporting ATPase, C-terminus 879 1052 IPR006068 -
Mibi06g1886 1076 PANTHER CATION TRANSPORTING ATPASE 111 1055 - -
Mibi06g1886 1076 CDD P-type_ATPase_Ca_PMCA-like 182 927 - -
Mibi06g1886 1076 FunFam Calcium-transporting ATPase 256 376 - -
Mibi06g1886 1076 PRINTS H+-transporting ATPase (proton pump) signature 794 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g1886 1076 PRINTS H+-transporting ATPase (proton pump) signature 826 851 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g1886 1076 PRINTS H+-transporting ATPase (proton pump) signature 651 669 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g1886 1076 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 760 882 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g1886 1076 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 245 519 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi06g1886 1076 FunFam Calcium-transporting ATPase 503 698 - -
Mibi06g1886 1076 SUPERFAMILY HAD-like 492 899 IPR036412 -
Mibi06g1886 1076 Gene3D - 58 119 - -
Mibi06g1886 1076 Pfam E1-E2 ATPase 278 471 - -
Mibi06g1886 1076 FunFam Calcium-transporting ATPase 811 1057 - -
Mibi06g1886 1076 Gene3D - 503 698 IPR023299 GO:0000166
Mibi06g1886 1076 Pfam Cation transporter/ATPase, N-terminus 160 225 IPR004014 -
Mibi06g1886 1076 PRINTS P-type cation-transporting ATPase superfamily signature 691 702 - -
Mibi06g1886 1076 PRINTS P-type cation-transporting ATPase superfamily signature 818 830 - -
Mibi06g1886 1076 PRINTS P-type cation-transporting ATPase superfamily signature 794 813 - -
Mibi06g1886 1076 PRINTS P-type cation-transporting ATPase superfamily signature 324 338 - -
Mibi06g1886 1076 PRINTS P-type cation-transporting ATPase superfamily signature 493 507 - -
Mibi06g1886 1076 PRINTS P-type cation-transporting ATPase superfamily signature 713 723 - -
Mibi06g1886 1076 Gene3D - 208 1053 - -
Mibi06g1886 1076 Gene3D - 490 839 IPR023214 -
Mibi06g1886 1076 Pfam Ca2+-ATPase N terminal autoinhibitory domain 49 91 IPR024750 GO:0005516
Mibi06g1886 1076 ProSitePatterns E1-E2 ATPases phosphorylation site. 495 501 IPR018303 -
Mibi06g1886 1076 SFLD Haloacid Dehalogenase 475 846 - -
Mibi06g1886 1076 SFLD p-type atpase 475 846 IPR044492 -
Mibi06g1886 1076 SUPERFAMILY Calcium ATPase, transduction domain A 278 374 IPR008250 -
Mibi06g1886 1076 FunFam Calcium-transporting ATPase 58 118 - -
Mibi06g1886 1076 SUPERFAMILY Calcium ATPase, transmembrane domain M 159 1055 IPR023298 -
Mibi06g1886 1076 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 148 1056 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Mibi06g1886 1076 FunFam Calcium-transporting ATPase 691 839 - -
Mibi06g1886 1076 SMART Cation_ATPase_N_a_2 155 230 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1886 Mibi-ChrMibi06 39336221 39345890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1886 99 1073 Primary Pumps ATPases AT3G57330 73.744 0.0 1499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1886 06 39336221 39345890 Mibi06g1886 06 39336221 39345890 ECH