Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1875 ATGGTCGGCAATGTCTTGTGCAAACAGTTGGGGTGCTTGCTGGCTTTTCCTCCTCTCTCTGAAGCATGCCTGAGTACTAGAGAATGGTGTTTGGAGTTTTTGAATTCTAAGAGATGGAATTGTGGTCTTGGAGGGGTGGTCAAGCAGGAACAACATCTTACACTTACAGAATCTGACAGAACACTAAGTGAAGCAAGAGAAGAACAGAGAAAGCATGCATTGACAGTGGCTATTGCAACAGCAGCAGCTGCTGAGGCTGCAGTAGCTGCAGCTCATGCTGCTGCTGAGGTTGTCAGGCTCACCGGTGCTTCTCGCTCCTACTCATATCTCTCCGAGGGAAACCGAAATTTGGCTGCTACCAAAATTCAAAGTGCATACCGTGGACATCTGGCCAGGAAAGCATTCAGAGCACTGAAGGGAATTATCAGACTGCAAGCTATAGTTCGTGGTCGAGCTGTGAGACGTCAAATGGGTTTGCACTCCAGTGGAAGAGAGCAGGAAGGAATCCAGATAAGCAGCAGTCATGCTGCAGATAGAATCAACAAAAATGACAAGAGCAAGCAGCTTCCAAGGCAGAAAAAGAAGTTGGAAGATGCAGAAATGAAGCTTGAATGCCATGGTCAAAGGAGTTGGGATTGCAGCTTGCACACAAAAGAAGACATGGAAGCTATATGGTTGAGAAAGCAAGAGGCTATTATTAAAAGAGAACGCATGAAGCAGTACTCTTTCTCACATCGGGAGAGAAAATTTTGCCATATGGGGGTTGAACAATTTCCCTATAAGGAATCTAGAGGAGAGAGCTGCCGCACTCTGGGACAATGGCTGGACAGAGAAAAATGTAATGGAAATATGTTGAATAAAACAACAATTCCTTCAAGCTTGGTCGCTAGGGAATGGTATGACATAACACAAGTTGCGGAGAAGAATGTGAAAATAGAAGAACACTTGCAAGAAGACGAATTGACTTCACAGTTTTCGTTTCCAAGAAATTCATTTTCTTATGTGAAGAAAAATTCAGTGGTAGATGAAAGTTCTATGCCAAATTCTCCGGTTTTCCCAACATTTGTGGGTGTGAGAGGAAAGGCAAGATCTATGAGCACTCCGAGACAAAGAACAGGATTTATGGATTCAGATTCTCAGAGTGAAGGCAGAACTTTGAGGTCTTGTGGTCATGAAGCAACTAGCAGTGCCAATGAAGAAAATGAAGTTTCTCAGGTGAGATGTCAGAGTGTGATCCGCCACTACTATCATTAG 1254 0.4402 MVGNVLCKQLGCLLAFPPLSEACLSTREWCLEFLNSKRWNCGLGGVVKQEQHLTLTESDRTLSEAREEQRKHALTVAIATAAAAEAAVAAAHAAAEVVRLTGASRSYSYLSEGNRNLAATKIQSAYRGHLARKAFRALKGIIRLQAIVRGRAVRRQMGLHSSGREQEGIQISSSHAADRINKNDKSKQLPRQKKKLEDAEMKLECHGQRSWDCSLHTKEDMEAIWLRKQEAIIKRERMKQYSFSHRERKFCHMGVEQFPYKESRGESCRTLGQWLDREKCNGNMLNKTTIPSSLVAREWYDITQVAEKNVKIEEHLQEDELTSQFSFPRNSFSYVKKNSVVDESSMPNSPVFPTFVGVRGKARSMSTPRQRTGFMDSDSQSEGRTLRSCGHEATSSANEENEVSQVRCQSVIRHYYH 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1875 417 MobiDBLite consensus disorder prediction 178 195 - -
Mibi06g1875 417 MobiDBLite consensus disorder prediction 163 177 - -
Mibi06g1875 417 MobiDBLite consensus disorder prediction 365 404 - -
Mibi06g1875 417 Gene3D - 114 162 - -
Mibi06g1875 417 MobiDBLite consensus disorder prediction 362 404 - -
Mibi06g1875 417 ProSiteProfiles IQ motif profile. 139 166 IPR000048 GO:0005515
Mibi06g1875 417 Coils Coil 182 202 - -
Mibi06g1875 417 Pfam IQ calmodulin-binding motif 118 136 IPR000048 GO:0005515
Mibi06g1875 417 SMART iq_5 114 136 IPR000048 GO:0005515
Mibi06g1875 417 ProSiteProfiles IQ motif profile. 115 143 IPR000048 GO:0005515
Mibi06g1875 417 MobiDBLite consensus disorder prediction 158 195 - -
Mibi06g1875 417 PANTHER IQ-DOMAIN 5-RELATED 59 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1875 Mibi-ChrMibi06 39256863 39259481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1875 51 377 IQD Protein Family AT5G03960 45.000 3.91e-52 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi06g1875 06 39256863 39259481 Mibi06g1875 06 39256863 39259481 ECH