Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1840 ATGGGAATGGCCGCGGAATCCCAATTCCATGTATTGGCCGTAGATGACAGCCTAATAGATAGGAAGCTGATTGAGAGGCTACTGAAGACTTCTTCCTATCAAGTTACTACGGTGGATTCTGGTAGCAAGGCTCTGGAGTTCCTTGGCTTGCTAGACAATGACCAGATTGAACCCACTACGCCATCAGTTTCTCCTGGTAATCATCAGGAAGTGGAGGTGAATCTTATTATTACGGACTACTGTATGCCTGGCATGACAGGCTATGATTTGCTCAAGAAAATCAAGGAATCTTCGTCTTTGAAAAACATACCAGTGGTGATTATGTCATCGGAGAATGTGCCTTCAAGAATTAACAGATGCTTGGAGGAAGGAGCAGAGGAGTTTTTTCTCAAGCCAGTAAGGCTATCAGATTTGAATAAGCTTCGACCCCATTTGATGAAGACAAAATTGAGAGAACAAAAGCCAGAAACACAAGAAAATCCTGAAAAACCACTAGTTCCGCTAGAAGAAATTCAAATTGATGTGCATCAACCTAAATCACAGCCACATCAAGAACAAGAACAACTATTACAACAGCAACAACAACAAGCACAACCACAATCACCACAACAAACAGCCTGTAATAATAACAAGAGAAAGGCCATAGAACAACAGGGGATTCCACCTGAGACTGACAGAACGAGACCTAGATACAGTGACATAGCCACAGTGGGATTTGATCGTTCTTGTATAAGGCCCATTATCATTGGAAAAATTGATGGAAGTGTATGGAGGGGGAGGTGGAAAGGAAGAGAATCCGAGTCACCTGAGCCCCACGTGCATCCCTCTCCTCCCACGTGTCGCCTTTTAAGCTCTTGGCCCAATTCAGTGTCTAGAGTTGATGCATTAAGGGCATTAGCTTCGTCACCTCCTCCCTTTTTCTCTCCACCCACAAACACACACACCCCTTTCCCCTCTCAAATCAACGTTCTTCAATTCCGATCCAATTCAGGTGATTGGTATAGGGCCTGTTCGTTGAATTCAAAGTACGACTGGAGCTTTACCTTGTGA 1050 0.441 MGMAAESQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLLDNDQIEPTTPSVSPGNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLSDLNKLRPHLMKTKLREQKPETQENPEKPLVPLEEIQIDVHQPKSQPHQEQEQLLQQQQQQAQPQSPQQTACNNNKRKAIEQQGIPPETDRTRPRYSDIATVGFDRSCIRPIIIGKIDGSVWRGRWKGRESESPEPHVHPSPPTCRLLSSWPNSVSRVDALRALASSPPPFFSPPTNTHTPFPSQINVLQFRSNSGDWYRACSLNSKYDWSFTL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1840 349 Pfam Response regulator receiver domain 11 140 IPR001789 GO:0000160
Mibi06g1840 349 Gene3D - 10 227 - -
Mibi06g1840 349 MobiDBLite consensus disorder prediction 147 166 - -
Mibi06g1840 349 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 203 IPR045279 GO:0009736
Mibi06g1840 349 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Mibi06g1840 349 MobiDBLite consensus disorder prediction 177 229 - -
Mibi06g1840 349 MobiDBLite consensus disorder prediction 177 215 - -
Mibi06g1840 349 CDD REC_typeA_ARR 11 141 - -
Mibi06g1840 349 SMART REC_2 9 142 IPR001789 GO:0000160
Mibi06g1840 349 SUPERFAMILY CheY-like 8 154 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1840 Mibi-ChrMibi06 38986407 38991869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1840 1 236 Response Regulator Gene Family AT3G57040 64.854 1.53e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi06g1840 Response_reg 1.5e-19 CL0304