Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1833 ATGTTAGCTTTTACGCCTTCTATGTTGGCACCCATTGATGAGTGGGCCTTGGAGGAACCCACTGGTTTTAATGGTCAAAACTTGCTTTACAAAGACGGAACTACTCTTCAGTTTCAGGTTGAGGCTCAGAGATCTCAGCCTAGACCTACGCCCGTATCCTCTGCCGTAAGTGGAGACCTTGCTGTGGTCAAAAAGCTAAACCATAATGCTAGTGAACGAGATCGTCGCAAGAAGATCAATAGCTTGTATTCTTCACTTCGTTCTATGCTTCCTTTGTCCGATCAAACGAAAAAATTAAGCATTCCTTCAACAATTTCACGTGTCCTAAAATACATACCGGAGTTACAGCAACAAGTGGAAGGGCTTATTAAGAAAAAGGAGGGGCTTTTGTTGAGAACCTCTCGGCAAGAAAGTTCAAGCAAAGAATATCAAAGAAAAATGGCCCATCATTATGCTGCCACTGCTTGTGTGGTTTCAACGAGCAGACTCAATGATAACGAAGCTGTCATTCAGATTTCCTCTGACAAGCTCCATAAAACTCCTCTTTCACAGATATTGCTTTGCTTAGAAAAGGAAGGCCTTTTACTGCTGAATGCTTCCACCTTTCAGAACTTTGGACAGCGGCTCTTCTATAACTTGTATATGCAGATGGATGAAACTTCTAGTATAGAGCCAGAACTTCTGAGCGAGAAGATTTTGTCAATATATGAGAGCATGGAAGGGAATTATCAATGTTTTATTAAATGA 747 0.4137 MLAFTPSMLAPIDEWALEEPTGFNGQNLLYKDGTTLQFQVEAQRSQPRPTPVSSAVSGDLAVVKKLNHNASERDRRKKINSLYSSLRSMLPLSDQTKKLSIPSTISRVLKYIPELQQQVEGLIKKKEGLLLRTSRQESSSKEYQRKMAHHYAATACVVSTSRLNDNEAVIQISSDKLHKTPLSQILLCLEKEGLLLLNASTFQNFGQRLFYNLYMQMDETSSIEPELLSEKILSIYESMEGNYQCFIK 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1833 248 SMART finulus 69 121 IPR011598 GO:0046983
Mibi06g1833 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 64 132 IPR036638 GO:0046983
Mibi06g1833 248 Gene3D - 61 148 IPR036638 GO:0046983
Mibi06g1833 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 63 115 IPR011598 GO:0046983
Mibi06g1833 248 Pfam Helix-loop-helix DNA-binding domain 64 116 IPR011598 GO:0046983
Mibi06g1833 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 62 233 IPR015660 -
Mibi06g1833 248 FunFam Transcription factor ORG2 59 145 - -
Mibi06g1833 248 CDD bHLH_AtORG2_like 64 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1833 Mibi-ChrMibi06 38902409 38903772 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1833 1 243 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 42.688 1.31e-56 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g1833 HLH 1.5e-12 No_clan