Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1832 ATGTTGGCTTTATCGCCTGCTCTGTTGGCACCCATTGAGTGGACCTTGGAGGAATCCACAAGTCATAATGCTGGGAGCTTGTTTTACAAAGACGACGGAGCTACTCCTCAGTTTAGTTGCTCGCCGCCTGCAGATCATGAGGTTGACTTTGAGATATCTCCGCCCATATCCCTTGCCGGAAGCGGCGACCTTACTGTGGTCAAAAAGCTAAACCATAATGCTAGTGAACGCGATCGTCGCAAGAAGATCAATAGCTTGTATTCCTCGCTTCGTTCTATGCTTCCTTTGGCTGATCAATCGAAAAAGTTAAGTATTCCGGCAACAATTTCACGAATTCTGAAGTACATACCGGAGTTACGGCAGCAAGTGGAAGGGCTTAATAAGAAAAAGGAGGAGCTTTTGTTGAGAATCTCTCAGCAAGGAGATGCGTCAAGCAAAGAATATCGAAAGAAAATGGCTCATCACTTTGCTGCCTCTGCTTGTGTTGTTTACACGAGCAGGCTCAATGATAACGAAGCTGCTGTTCATATTTCCTCTGACAAGCTCCACGAAACACCTCTTTCACAGATATTGCTTTGTTTAGAAAAGGAAGGTCTTCCACTGCTAAATGCTTCCACCTTTAACACCTTTGGACAACGTGTCTTCTATAACTTGCATTTGCAGATGGATGAAACTTGTAGAATAGAGCCAGAAATTATAAGCGAGAAGATTTTGTCAGTATATGAGAAGAAGGAAGGAAATTTTCAATGTTTGTAA 756 0.4312 MLALSPALLAPIEWTLEESTSHNAGSLFYKDDGATPQFSCSPPADHEVDFEISPPISLAGSGDLTVVKKLNHNASERDRRKKINSLYSSLRSMLPLADQSKKLSIPATISRILKYIPELRQQVEGLNKKKEELLLRISQQGDASSKEYRKKMAHHFAASACVVYTSRLNDNEAAVHISSDKLHETPLSQILLCLEKEGLPLLNASTFNTFGQRVFYNLHLQMDETCRIEPEIISEKILSVYEKKEGNFQCL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1832 251 Gene3D - 64 153 IPR036638 GO:0046983
Mibi06g1832 251 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 65 236 IPR015660 -
Mibi06g1832 251 SMART finulus 73 125 IPR011598 GO:0046983
Mibi06g1832 251 FunFam Transcription factor ORG2 63 148 - -
Mibi06g1832 251 Pfam Helix-loop-helix DNA-binding domain 68 119 IPR011598 GO:0046983
Mibi06g1832 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 67 119 IPR011598 GO:0046983
Mibi06g1832 251 CDD bHLH_AtORG2_like 68 140 - -
Mibi06g1832 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 138 IPR036638 GO:0046983
Mibi06g1832 251 Coils Coil 116 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1832 Mibi-ChrMibi06 38897416 38898976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1832 1 248 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 43.023 3.24e-57 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g1832 HLH 1.9e-11 No_clan