Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1815 ATGGGACTGTGTCATGGAAAACCAAACGAAATCCCACAAACACAAGGAGGAGAAAATCCAATATTCTGCGATGACAACAAAGAGGGAGTTCCGAATTCTCAAGGAAGGAAATCCACAAACTTTCCCTTTTATAGCCCAAGTCCTTTACCGAGCCTCTTCAAGAACTCACCTGCAATCTCAAGCTTGAGCTCAACTCCTTTACGCATATTCAAGCGTCCATTTCCTCCTCCTTCGCCAGCCAAGCACATTCGGTCATTGCTTGCTCGTAGGCATGGTTCTGTGAAGCCAAACGAAGCCTCCATCCCCGAAGGAAGCGAGTGCCACGTTGAACTTGAACTTGATAAGTGTTCTGGGTTTTCCAAGCAGTTCCTAGTTCATTATGAGATTGGAGAAGAAGTGGGACGTGGCCATTTTGGATATACTTGCTCCGCTAAGGGAAAGAAAGGTAGCTTGAAGGGGCAGGATGTGGCAGTCAAAGTCATCCCAAAATCCAAGATGACAACAGCTATTGCTATAGAGGATGTCAGGAGAGAAGTGAAGATGTTGAGGGCTCTAACAGGACATAAGAACCTGGTGCAATTCTACGAGGCCTATGAAGATGATGACAATGTTTATATAGTTATGGAGTTATGCAAAGGAGGTGAGCTCCTAGACAGAATACTTTCCAGGGGTGGAAAGTACTCAGAAGAGGACGCCAAGGCTGTTATGATTCAGATAGTAAGTGTGGTGGCTTTCTGTCATCTTCAGGGTGTGGTTCATCGAGATCTCAAGCCAGAGAATTTTCTTTTTACATCTAAGGATGAAAACTCCACGCTAAAGGCTATTGACTTTGGTCTCTCTGACTATGTAAAGCCAGTTCTTACAGATGAAAGGTTAAATGATATTGTGGGAAGTGCATACTATGTGGCTCCGGAAGTTTTGCATAGATCTTATGGGGCTGAAGCAGACATGTGGAGCATTGGTGTAATTGCTTACATTCTATTGTGTGGAAGCCGTCCTTTCTGGGCCCGGACGGAATCTGGCATTTTTCGAACTGTTCTGAAGGCAGATCCAAGTTTTGATGAAGCTCCTTGGCCTTCTTTATCAGTTGATGCAGTAGATTTTGTAAAGAGACTATTGAATAAGGATTATCGTAGGAGATTAACTGCAGCTCAGGCTCTTTGTCATCCATGGCTTGCAAATCATGATGATGATGTGAAGATACCTCTGGATATGATAATCCCCAAGTTTGTTAGGGCTTACACATGCTCATCTTCTTTACGCAAATCAGCACTAGGGGCTCTTGCCAAGACATTGACAGTTGCTCAGCTAGCTTATTTCAGAGAACAATTTACTCAGTTAGGGCCAAACAAAAGTGGATTTATCTCAATGCAGAACTTTAAGACGGCTTTTTTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGGGTCTTGGATTATGTGAACATGATTAGTTCTATCCAGTACAGGAAGTTAGACTTTGAGGAATTTTGCGCTGCTGCTATAAGTGTGCACCAACTAGAGGGTTTGGATACCTGGGAGCAACATGCTAGGAGAGCCTTTGAGCTCTTCGAAAAGCGCGGAAATAGACCAATTATGATTGATGAACTAGACTCGGAACTTGGGCTCAGCCCATCAGTGCCTGTTCATGTGGTTCTGCAAGATTGGATAAGACATGCAGATGGAAAACTGAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGAGTTTCTTCCCGCACATTTCAGAAGGCTTGA 1755 0.441 MGLCHGKPNEIPQTQGGENPIFCDDNKEGVPNSQGRKSTNFPFYSPSPLPSLFKNSPAISSLSSTPLRIFKRPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGSECHVELELDKCSGFSKQFLVHYEIGEEVGRGHFGYTCSAKGKKGSLKGQDVAVKVIPKSKMTTAIAIEDVRREVKMLRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGELLDRILSRGGKYSEEDAKAVMIQIVSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPVLTDERLNDIVGSAYYVAPEVLHRSYGAEADMWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEAPWPSLSVDAVDFVKRLLNKDYRRRLTAAQALCHPWLANHDDDVKIPLDMIIPKFVRAYTCSSSLRKSALGALAKTLTVAQLAYFREQFTQLGPNKSGFISMQNFKTAFLRSSTDASKDSRVLDYVNMISSIQYRKLDFEEFCAAAISVHQLEGLDTWEQHARRAFELFEKRGNRPIMIDELDSELGLSPSVPVHVVLQDWIRHADGKLSFLGFVRLLHGVSSRTFQKA 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1815 584 FunFam Calcium-dependent protein kinase SK5 302 398 - -
Mibi06g1815 584 Pfam Protein kinase domain 127 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1815 584 FunFam CDPK-related kinase 1 120 215 - -
Mibi06g1815 584 Gene3D Phosphorylase Kinase; domain 1 120 216 - -
Mibi06g1815 584 ProSiteProfiles Protein kinase domain profile. 127 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1815 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Mibi06g1815 584 PANTHER SERINE/THREONINE-PROTEIN KINASE 113 560 - -
Mibi06g1815 584 FunFam CDPK-related kinase 3 119 291 - -
Mibi06g1815 584 SMART serkin_6 127 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1815 584 SUPERFAMILY Protein kinase-like (PK-like) 126 430 IPR011009 -
Mibi06g1815 584 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
Mibi06g1815 584 MobiDBLite consensus disorder prediction 1 41 - -
Mibi06g1815 584 CDD STKc_CAMK 126 391 - -
Mibi06g1815 584 FunFam CDPK-related kinase 1 430 502 - -
Mibi06g1815 584 SUPERFAMILY EF-hand 422 575 IPR011992 -
Mibi06g1815 584 Gene3D - 412 575 - -
Mibi06g1815 584 ProSitePatterns Protein kinases ATP-binding region signature. 133 159 IPR017441 GO:0005524
Mibi06g1815 584 Gene3D Transferase(Phosphotransferase) domain 1 217 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1815 Mibi-ChrMibi06 38714487 38718540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1815 1 582 EF-hand Containing Proteins AT3G50530 66.244 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi06g1815 Pkinase 2.1e-67 CL0016