Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1805 ATGAAGTCGGGCTCACTGGATTACTGGAGGAGTTACTTTCGGACTGCTAATTCTGATATATTCAATATTATTGACCATGCCATCATGGTGGCGGTTTCCGATTGCCCCAAGGAATTTAGATTGCGGAGAGATGGGATTGCGGAGCGTTTGTTTTCTTGTAGATTGACTCGTTGTGTGGGGTGTGATCGACTAGAGTTGGCGGTTTCAGGTGATGATGATGAGGAAAATGATGGAGGTTGTAAGAGTGGTTTTGATAGAGAAGCTACTGAATTGGAAGCAGGAGCTAGTAAAGAGAGCAAGGTCAATAGTGTCAGAGACGATCATGGAGAGATCGACAGGAACCAAGTTAGTAATTTTAGTTTTGGGGAAGCTGAGGCATTGACTGATGAGATTGAAGAACAGTCTCAGATGGTTGGGGAGGTTTTGAGGATCAAAAAGATTCTCCATAACAGCAAGGAAGAGCCTGATTCAGTGTTATTTGAGTCATTGAGGAAGCTTCAGCTGCTGGCACTGACCGTGGATCTTCTCAAGGGAACTGAAATTGGAAAGGCTGTCAATCCTCTCAGGAAGCACCGATCAAAGGACATTTGTAAACTTGCACGAACTCTTATCGATGACTGGAAATCAATGGTAGATGAATGGGTCAAGTCCACGGCAGCTATAGCAGGTTCAGCAGAAGGCACTCCAGATTCAGTTAATCCATCAGTCATTGATGAAGAGGAAGGGCTTCCTTCACCTCCTTTGGATGAAGGGGCTTTTTTTGCAGCTCCAGCTGGTCCAATGGAACTCTCACAGTTCTTTGATGGCATGGATGATGATGGAAATTTTCGACAAAGTGGAGAATTCATCAAGACCTGCGAACACATCAGAAAACCAACTGTAGACAGTCAAAACATAGCAAAGAGAAAACCACAGGCTTCCAGTGAAACCAAGGAGAGTAAAAGTCATCAAACGATGAGAAATGAAGTTATTATGAGACAGAGTAAACCAGTCTGCACTGATTCTGGCCCTGGCAGGCCTCCAAAATCCAGCTTGCAGCAAAAAAGCAACACAGGACCAAGGATGCAGCAGAGACAAGATATGAGTGCTATCCCAAAGAGGCCTCTTATTGCTCAGCAAGATAAATTCAAGGGCTCAGAGGACGTTTCAGTCCAAGCGAAACTAGAAGCCACTAAGAGGAAACTTCAGGAGTCTTATCAACAAGCTGAAAATGCCAAGAAGCAGCGAACAATACAGGTTATGGAGTTGCATGATCTTCCAAAGCAAGGGAATGGCCACCGAAATCCACACTTCAAGCCTGGGAACTACAACAAGAGCTGGGCTCAGGGACGGAGATAG 1338 0.4499 MKSGSLDYWRSYFRTANSDIFNIIDHAIMVAVSDCPKEFRLRRDGIAERLFSCRLTRCVGCDRLELAVSGDDDEENDGGCKSGFDREATELEAGASKESKVNSVRDDHGEIDRNQVSNFSFGEAEALTDEIEEQSQMVGEVLRIKKILHNSKEEPDSVLFESLRKLQLLALTVDLLKGTEIGKAVNPLRKHRSKDICKLARTLIDDWKSMVDEWVKSTAAIAGSAEGTPDSVNPSVIDEEEGLPSPPLDEGAFFAAPAGPMELSQFFDGMDDDGNFRQSGEFIKTCEHIRKPTVDSQNIAKRKPQASSETKESKSHQTMRNEVIMRQSKPVCTDSGPGRPPKSSLQQKSNTGPRMQQRQDMSAIPKRPLIAQQDKFKGSEDVSVQAKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGNGHRNPHFKPGNYNKSWAQGRR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1805 445 Pfam TFIIS helical bundle-like domain 163 211 IPR017923 -
Mibi06g1805 445 MobiDBLite consensus disorder prediction 293 365 - -
Mibi06g1805 445 MobiDBLite consensus disorder prediction 419 445 - -
Mibi06g1805 445 MobiDBLite consensus disorder prediction 339 358 - -
Mibi06g1805 445 ProSiteProfiles TFIIS N-terminal domain profile. 139 214 IPR017923 -
Mibi06g1805 445 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 129 222 IPR035441 -
Mibi06g1805 445 MobiDBLite consensus disorder prediction 225 245 - -
Mibi06g1805 445 Coils Coil 385 412 - -
Mibi06g1805 445 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 433 IPR044805 -
Mibi06g1805 445 CDD TFIIS_I 140 212 - -
Mibi06g1805 445 SMART TFS2_5 141 213 IPR003617 GO:0005634
Mibi06g1805 445 MobiDBLite consensus disorder prediction 305 319 - -
Mibi06g1805 445 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 133 223 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1805 Mibi-ChrMibi06 38646057 38648755 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mibi06g1805 Med26 1.1e-10 No_clan