Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1801 ATGGCCACAAGAACCGTTGTTCCACACCAAGCTGTCAGAGGGGAGGCAGTGGTTGGAGGAGTAAAACAGCAAAAGAAGAATGTAGCGGCAGATGGAAGAAATCGTAGAGCCCTCGGCGACATCGGAAATCAGGTTCCTCCAAGACCTATTGAAGTCGTCAAACCCAACCGTCCAGTCACCAGGAGTTTCCGTGCCCAACTTCTTGCTAATGCACAAGCAGCTGCTGAAAACAACAAGAAACAGGCTTGTGCAAATGTGGGTGGACCTCCTCCTGTTCTTGATGTGCTTGCTAATAGAGCCGCTGCCGCGGCACCTAAGCCTGCTCAGAAGTTAGTGTCTGTTAAACCAAGGAATGAAAATGTTTCTGAAGTAAGATCGGAAGAGGAGATTAGAAAGGAGAAGGCTGGACACAAGAAGAAAGATGGGGATGAGAAATCAAAGAAGAAACCACACACTCTCACTTCAGTACTCACAGCTCGAAGCAAGGCAGCATGTGGTGTGACCAACAAACCAAAGGAGCAGATTGTCGACATTGATGCATCAGACACTAAAAATGAGCTTGCAGCTGTGGAGTATATTGATGACATTTACAAGTTTTATAAGCTAGTTGAGAATGAGAACCGTCCTCACGACTATATTGGGTCGCAGCCTGAGATTAATGAAAAGATGAGAGCAATATTAGTTGATTGGCTCATAGATGTCCATTCCAAGTTTGATCTTTCGCCAGAAACTCTTTATCTGACTATCAATATAATAGATCGATTTCTTTCGACCAAGATCGTGCCAAGAAGGGAACTTCAATTAGTTGGTATCAGCGCCATGCTCATGGCTTCCAAGTATGAAGAAATCTGGCCCCCTCAGGTCAACGACTTTGTATTCCTATCGGACAGAGCTTATAGTCATGAACAAATACTGGCAATGGAGAAAACCATTCTGGGGAAGCTGGAATGGACTTTGACAGTACCTACACACTATGTGTTCCTTGTCCGTTTCATCAAGGCATCACTCCCAGACGAGGAGTTGGAAAACACGGTGCATTTTCTTGCTGAGTTAGGACTGATGAATTATGAGAGCATGATAGTGCACAGCCCATCAAAGGTTGCAGCATCAGCAGTGTATGCAGCTAGGTGCACTCTGAACAAGACTCCTTCTTGGAACGAAACACTCACTCTACACACTGGCTACTCCGAACAACAACTCATGGAATGTGCAGGGGAATTGGTGAGGTGTCACTCCATGGCTGGGAGTGGGAAGCTGCAGGCAGTGCACAGGAAGTACTCAGATGGGAAGAGAGGGACGGTGGCGCTGCTTCCACCCGCCAAGAATCTTCTGTTACAGTTGGGGAAAGAAGGAAGATGA 1359 0.465 MATRTVVPHQAVRGEAVVGGVKQQKKNVAADGRNRRALGDIGNQVPPRPIEVVKPNRPVTRSFRAQLLANAQAAAENNKKQACANVGGPPPVLDVLANRAAAAAPKPAQKLVSVKPRNENVSEVRSEEEIRKEKAGHKKKDGDEKSKKKPHTLTSVLTARSKAACGVTNKPKEQIVDIDASDTKNELAAVEYIDDIYKFYKLVENENRPHDYIGSQPEINEKMRAILVDWLIDVHSKFDLSPETLYLTINIIDRFLSTKIVPRRELQLVGISAMLMASKYEEIWPPQVNDFVFLSDRAYSHEQILAMEKTILGKLEWTLTVPTHYVFLVRFIKASLPDEELENTVHFLAELGLMNYESMIVHSPSKVAASAVYAARCTLNKTPSWNETLTLHTGYSEQQLMECAGELVRCHSMAGSGKLQAVHRKYSDGKRGTVALLPPAKNLLLQLGKEGR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1801 452 CDD CYCLIN 223 312 IPR013763 -
Mibi06g1801 452 SMART Cyclin_C_2 322 440 IPR004367 -
Mibi06g1801 452 Pfam Cyclin, N-terminal domain 195 319 IPR006671 -
Mibi06g1801 452 FunFam G2/mitotic-specific cyclin-1 310 435 - -
Mibi06g1801 452 Pfam Cyclin, C-terminal domain 322 439 IPR004367 -
Mibi06g1801 452 Gene3D - 209 320 - -
Mibi06g1801 452 MobiDBLite consensus disorder prediction 104 155 - -
Mibi06g1801 452 PANTHER CYCLINS 143 428 IPR039361 -
Mibi06g1801 452 MobiDBLite consensus disorder prediction 120 151 - -
Mibi06g1801 452 PIRSF Cyclin_A_B_D_E 1 450 IPR039361 -
Mibi06g1801 452 Gene3D - 195 435 - -
Mibi06g1801 452 CDD CYCLIN 320 408 IPR013763 -
Mibi06g1801 452 SUPERFAMILY Cyclin-like 321 441 IPR036915 -
Mibi06g1801 452 SUPERFAMILY Cyclin-like 185 319 IPR036915 -
Mibi06g1801 452 MobiDBLite consensus disorder prediction 37 57 - -
Mibi06g1801 452 ProSitePatterns Cyclins signature. 224 255 IPR006671 -
Mibi06g1801 452 SMART cyclin_7 229 313 IPR013763 -
Mibi06g1801 452 SMART cyclin_7 326 409 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1801 Mibi-ChrMibi06 38592938 38595207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1801 1 444 Core Cell Cycle Gene Families AT4G37490 54.967 3.90e-152 437