Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1800 ATGAGGGAGGACGACACAAATTTGTTCTCGAGATGGGAAGAGGGTCTTCCTTCCCCAGATGAACTCACTCCTCTCTCCCAAACTCTAATCACTCCTGATCTTGCCATGGCTTTCGACATCCAAAACCCCCACAGTAATATCCCTCAACCCCCACCTCCTTCCAATCCCTTACCTTCTCCAGGGAATCCCACACATCCCAACTCTGCTGAATTTGCGGATTCCGGCGAGCTCGGTTCTGAAGAGCCCGCACGCACACTCAAGCGCCCTCGCCTCGTGTGGACCCCACAACTTCACAAGAGGTTCGTCGATGCAGTCGCTCACTTGGGTATCAAAAACGCCGTCCCGAAAACCATAATGCAGCTCATGAGTGTCGATGGGTTGACCAGAGAAAACGTCGCCAGTCACCTGCAAAAATATCGACTTTACTTGAAGCGCATGCAGGGACTATCCGCCGCCGGCAGCGGCGGCGCCGGTGTCTCCTCCGATCCCGCCACTGATAATCTATTTGCAAGCTCCCCTGTGCCTCCACATTTCTTACATCCCGTAGGTAGGTCCAATTCCGACCATTTCTTGCCGTTTGTGCCAGTTCCGGCGACTTTGCAGCATCACCATCAACACCAACAACATATGGCCCAATTGCAGCAGCAGCAGTATCAGAGACAAGTGGGGAATTTTGGGTCGCCGCCCAATGGGAGCTTTGAGCATAGTTTTCTGACAAGGCAGGCTCAACCACTTCATAGGATGGGTCAAGCAATGCAGCATAATTTAGTTCCTGGAGGATATGTGGAGGACATGGAATCGGCTAATGCAGCTGGAGGAAGAAAGGTTCTGACTTTATTTCCTACTGCAGATGATTGA 858 0.5198 MREDDTNLFSRWEEGLPSPDELTPLSQTLITPDLAMAFDIQNPHSNIPQPPPPSNPLPSPGNPTHPNSAEFADSGELGSEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAAGSGGAGVSSDPATDNLFASSPVPPHFLHPVGRSNSDHFLPFVPVPATLQHHHQHQQHMAQLQQQQYQRQVGNFGSPPNGSFEHSFLTRQAQPLHRMGQAMQHNLVPGGYVEDMESANAAGGRKVLTLFPTADD 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1800 285 MobiDBLite consensus disorder prediction 45 63 - -
Mibi06g1800 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 93 144 IPR017930 -
Mibi06g1800 285 Pfam Myb-like DNA-binding domain 92 140 IPR001005 -
Mibi06g1800 285 Gene3D - 85 147 - -
Mibi06g1800 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 255 IPR044841 GO:0003700|GO:0006355
Mibi06g1800 285 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 141 IPR006447 GO:0003677
Mibi06g1800 285 MobiDBLite consensus disorder prediction 41 83 - -
Mibi06g1800 285 MobiDBLite consensus disorder prediction 1 25 - -
Mibi06g1800 285 FunFam Two-component response regulator 84 147 - -
Mibi06g1800 285 SUPERFAMILY Homeodomain-like 85 145 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1800 Mibi-ChrMibi06 38588746 38589603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1800 1 285 G2-like Transcription Factor Family AT3G10760 56.725 4.92e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi06g1800 Myb_DNA-binding 2e-08 CL0123