Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1792 ATGGCATTGTCTTCTCTGGTTTCCACTCTCCAAAACGAATTGAATTTCAAAGAAGAGACTGAATTTCCTGAGATTCAAATCGGAAACGAGGGCCTCACAAAACGCATACTCAAAACAGGACTCTCATGGCAAACTCCATCTCCTGGAGATCAAGTCCAAGTTTATTTCAGAGGGCATGTTCTGAATGGAGCATCACTTGAATCAAGTCACGACCATGGGACCCCATTTTGCTTCAACTTAGGCCAATGTGAAGTTATCAAAGGCTGGGATGAGGGAGTTGCCACCATGAGAAAGGGGGAGAGCGCAGTCTTCAAAATACCACCAAACATGGCGTATGGAGAGAGAGGTTCTCCGCCATTGGTTCCTCCGAATGCGACCCTCATCTTTGAGATTGAGATGCTGTCTTGGATTACCATCAGGGACTTGACTGGAGATGGAGGAATCCTGAAGAAGATAATAAGGGAGGGGGAGGGATGGGAGACTCCTAGGGATGCTGATGAGGTCTTAGTGAAATATGAAGCAAAGCTAGAGGATGGAATGCTGGCTCATGAGTTTAATGAAGGTGTAGAATTTAATATAAGTGATGGCTATCTCTGTCCTGCCATGAGTATAGCATTGAAAACAATGAGAAAGGGGGAGGAAGCAGAGCTCAGTTTAAGATTGTTTTATGGCTTGATGCAAAATTCAAGTGGCACAAGTAAAACCAATGGCAGTGACCAACCAGATTCAAATTTAACATGTCTCAGACTAGAGCTGGTCTCATGGAAAACAGTGGTAGATATCACAGGAGATAAGAAGATAATGAAGAAGATTGAGAAAGTTGGAGAGGGGTTTGAGCGTCCGAATGAAGGATCACAAGTTAAAAGTTTAATATATACGAGCAAATTAGAAGATGGAACAATTATTGAGAGGAAAGGATCAGAGGAAGAACCTTTTGAATTCACAACTCAGGAAGGCATATACGAACAAGCACCCGAGGGGCTAGAAAAAGCAATCATGACAATGAGAAAAGGAGAGCAAGCCACTGTAACTGTCACGGCAGAATATTTGTCTGATAAAAATAAATTTCTCACCACCCCAGCTAATTATAAAGTCCTTTATTATGAGGTCCAATTGGTTGATTTCATCAAGGAGAAGCCATTTTGGAAAATGAACACTCAGGAGAAAATAGAAGCTTGTGAGAGGAAGAAGCATGACGGAAATCTATTGTTCAAGGCTGAAAAGTTCAGGCGTGCGTCCAACAAATATGAAAAGGCTGTAAAATGCATTGAGTTTGATCACTCATTCAATGATGATGAGAAACGCCAAGCCAATGCCTTAAGGATATCATGTTATTTGAACAATGCTGCTTGTAAACTTAAATTGGGGGAATATGCTGAAGCCTCAAAACTGTGTACTAAGGCTTTGGAACAAGATCCATTAAATGTGAAGGCACTGTACAGAAGATGCCAGGCATACCTGAAAACATCAGAGTTAGAGAAAGCTGAGGCTGACATTAAAAGAGCCCTCACCATTGATCCAAACAACAGGGACATGAGAGTAGAGTACAGGGAGCTGAAGCTTAAACAAAAGGAATACAATAGATATGAAGCTGACATCTTCAGCACAATGCTTTCAAGAATGGGCTAG 1629 0.4174 MALSSLVSTLQNELNFKEETEFPEIQIGNEGLTKRILKTGLSWQTPSPGDQVQVYFRGHVLNGASLESSHDHGTPFCFNLGQCEVIKGWDEGVATMRKGESAVFKIPPNMAYGERGSPPLVPPNATLIFEIEMLSWITIRDLTGDGGILKKIIREGEGWETPRDADEVLVKYEAKLEDGMLAHEFNEGVEFNISDGYLCPAMSIALKTMRKGEEAELSLRLFYGLMQNSSGTSKTNGSDQPDSNLTCLRLELVSWKTVVDITGDKKIMKKIEKVGEGFERPNEGSQVKSLIYTSKLEDGTIIERKGSEEEPFEFTTQEGIYEQAPEGLEKAIMTMRKGEQATVTVTAEYLSDKNKFLTTPANYKVLYYEVQLVDFIKEKPFWKMNTQEKIEACERKKHDGNLLFKAEKFRRASNKYEKAVKCIEFDHSFNDDEKRQANALRISCYLNNAACKLKLGEYAEASKLCTKALEQDPLNVKALYRRCQAYLKTSELEKAEADIKRALTIDPNNRDMRVEYRELKLKQKEYNRYEADIFSTMLSRMG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1792 542 Gene3D Tetratricopeptide repeat domain 379 536 IPR011990 GO:0005515
Mibi06g1792 542 FunFam Peptidylprolyl isomerase 381 536 - -
Mibi06g1792 542 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 49 137 IPR001179 GO:0003755
Mibi06g1792 542 SUPERFAMILY TPR-like 382 537 IPR011990 GO:0005515
Mibi06g1792 542 Pfam Tetratricopeptide repeat 453 510 - -
Mibi06g1792 542 SUPERFAMILY FKBP-like 260 395 - -
Mibi06g1792 542 Gene3D - 140 256 IPR046357 GO:0003755
Mibi06g1792 542 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 165 256 IPR001179 GO:0003755
Mibi06g1792 542 SUPERFAMILY FKBP-like 11 138 - -
Mibi06g1792 542 Gene3D - 8 139 IPR046357 GO:0003755
Mibi06g1792 542 SUPERFAMILY FKBP-like 142 220 - -
Mibi06g1792 542 PANTHER PEPTIDYLPROLYL ISOMERASE 27 135 - -
Mibi06g1792 542 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 160 226 IPR001179 GO:0003755
Mibi06g1792 542 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 280 373 IPR001179 GO:0003755
Mibi06g1792 542 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 44 134 IPR001179 GO:0003755
Mibi06g1792 542 SMART tpr_5 442 475 IPR019734 GO:0005515
Mibi06g1792 542 SMART tpr_5 393 426 IPR019734 GO:0005515
Mibi06g1792 542 SMART tpr_5 476 509 IPR019734 GO:0005515
Mibi06g1792 542 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 285 376 IPR001179 GO:0003755
Mibi06g1792 542 ProSiteProfiles TPR repeat profile. 476 509 IPR019734 GO:0005515
Mibi06g1792 542 Gene3D - 257 378 IPR046357 GO:0003755
Mibi06g1792 542 FunFam Peptidyl-prolyl cis-trans isomerase 25 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1792 Mibi-ChrMibi06 38502787 38505931 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1792 24 541 Calmodulin-binding Proteins AT5G48570 52.762 0.0 555