Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1791 ATGTCAGAGAGAATGAACGTGGGAGGTGGTGAGGACAGAAAGATGAAGCGGAAGCTAGAGGAGGTGGTGGTGATGGCCATGGAGGAAGGTTTTGGCGAGACTAATGGCAGGGAAGAACATTTCCTCTCCCTCACTGTCTCCAACAACGCCGACATGTCCAAACCTTTGACGGCGCCGCCTCCACCTCCGCCATCCCCGGAGCCAGAACCACCGGCGGCGGCGGCGGCGGCGGGCATAATAATAAGTAGGAGTAGGGAGTTTGGGTGCAAGTACTGCTTGAAGAAGTTCAAAAGCTCGCAGGCATTGGGTGGACACCAAAATGCTCATAGGAGGGAGAGAGTTATATGGAAGATGGAGAATGAAATCAATACTACTTTTGGGCATCACCACCCTCACTTTTGTCCATGCTCTTCCGTTTTACCAATCTCTCGTACTACTCCTGTTTCTTCTCCTTCAGCATTCAATAATAATATCATTGACCCTCATTTTCATCATCTTCACCACCAACACCACCATGCAGTTGCTGGGTCCCACTACCATTTTCTTGGTCATCATCAAATCCAACCAATTATGAGACCTGATTTGGCCTATGGCTTGATGATGAACAGTGTTTCTGGTGGGAATACTAATGTTCCAAATGTTGAGGAGGAGAAGCCTGATGTGTCCTCTGGTGGTCTCGACCTGTCCCTCAAGCTCTGA 699 0.4936 MSERMNVGGGEDRKMKRKLEEVVVMAMEEGFGETNGREEHFLSLTVSNNADMSKPLTAPPPPPPSPEPEPPAAAAAAGIIISRSREFGCKYCLKKFKSSQALGGHQNAHRRERVIWKMENEINTTFGHHHPHFCPCSSVLPISRTTPVSSPSAFNNNIIDPHFHHLHHQHHHAVAGSHYHFLGHHQIQPIMRPDLAYGLMMNSVSGGNTNVPNVEEEKPDVSSGGLDLSLKL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1791 232 SUPERFAMILY beta-beta-alpha zinc fingers 84 115 IPR036236 -
Mibi06g1791 232 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 65 156 IPR044246 GO:0009788
Mibi06g1791 232 Gene3D Classic Zinc Finger 80 129 - -
Mibi06g1791 232 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Mibi06g1791 232 MobiDBLite consensus disorder prediction 55 71 - -
Mibi06g1791 232 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Mibi06g1791 232 MobiDBLite consensus disorder prediction 43 74 - -
Mibi06g1791 232 MobiDBLite consensus disorder prediction 208 232 - -
Mibi06g1791 232 Pfam C2H2-type zinc finger 87 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1791 Mibi-ChrMibi06 38496998 38497696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1791 85 142 C2H2 Transcription Factor Family AT1G24625 53.448 3.40e-14 67.4