Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1771 ATGGTGGCGCGTACTATACTACTACACGAAACAAAGAGAACACAGAGGAAGGGAGTTACGTGGGAAGTGGGGCCCACAACTTGGTTCCGTCCATTTAAACGCAGCCGTCTGTCCATTCAACGCCTGGGTTTTGCAATTGTTATGGGATTCTGTTTTTCTCTCCCTCCCTCAAATCCAATCACTCCCTGCGACACAAACACACCAACGAATCTCAATCCTCTTCCCCCCTATCTCTCCCGGAATATTCCCTCCTTCTTCCCCCCCACCATTTTCTCATCCCCTCTTCCGATTTTGGAATCTCCTCTTCTTTCGTTGCTCCGTCGTCTTCCGGAGGTTGTTTATTTCTTGCCTTATCATCTTCCCCTTCCAATTCCCACGCCTAATTTCAACTTTTCAGTCAGTAGAACTATGTATCACGCGAAGAAGTTTCCCCCGGGAACTGTTGTGCCTAATAAAGCTCAAGCTGGTGCTGAGCAGCTTGCAACTATACCGGATTTGAGTGGATCTGCTGTAAAAAATGCAACACCTGTGGGAGGAAGTGCGAAACAACGTTTACGGTGGACGTCAGATCTTCATGACCGTTTTGTGGATGCCATAACTCAACTTGGTGGACCAGATAGAGCAACTCCAAAAGGCGTTCTACGGGTTATGGGTGTACCTGGGCTCACAATTTATCACGTCAAAAGCCATTTACAGAAATACCGCCTTGCAAAGTACCTGCCAGAGTCTTCAGCTGACGAGTCTAAGGATGAGAAATGGAATTCTGGAGACACTGGATCTGGCCCAGATTCTTCCCCGGGATTGCAAATCAGTGATGCTCTGAGGATGCAGATGGAGGTTCAGAAACGTCTCCATGAACAGCTAGAGGTTCAAAAGCAGTTACAGATGAGAATTGAAGCGCAGGGTAAATACTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGTAATACCTTGAGAGCTTCGGAAACACTACCATCATCAAAAGATGAGCAAGATCATGTGCAGTCAGAACCTTCAGGTGATGATGCCTCTGCAGAGACACAGTCTCCGTTGAAGAAACAGAGAGTAGATGATGGCTCCAAGAATGGCATCACGAGCCTTCCAACTACCAATGAAGACTGCACAGAAGATTGA 1137 0.4714 MVARTILLHETKRTQRKGVTWEVGPTTWFRPFKRSRLSIQRLGFAIVMGFCFSLPPSNPITPCDTNTPTNLNPLPPYLSRNIPSFFPPTIFSSPLPILESPLLSLLRRLPEVVYFLPYHLPLPIPTPNFNFSVSRTMYHAKKFPPGTVVPNKAQAGAEQLATIPDLSGSAVKNATPVGGSAKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDEKWNSGDTGSGPDSSPGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLRASETLPSSKDEQDHVQSEPSGDDASAETQSPLKKQRVDDGSKNGITSLPTTNEDCTED 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1771 378 MobiDBLite consensus disorder prediction 243 269 - -
Mibi06g1771 378 MobiDBLite consensus disorder prediction 326 340 - -
Mibi06g1771 378 MobiDBLite consensus disorder prediction 361 378 - -
Mibi06g1771 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 179 239 IPR017930 -
Mibi06g1771 378 SUPERFAMILY Homeodomain-like 181 236 IPR009057 -
Mibi06g1771 378 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 182 237 IPR006447 GO:0003677
Mibi06g1771 378 FunFam Myb family transcription factor 181 239 - -
Mibi06g1771 378 MobiDBLite consensus disorder prediction 321 378 - -
Mibi06g1771 378 Pfam MYB-CC type transfactor, LHEQLE motif 268 314 IPR025756 -
Mibi06g1771 378 Pfam Myb-like DNA-binding domain 185 235 IPR001005 -
Mibi06g1771 378 Gene3D - 181 240 - -
Mibi06g1771 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 179 350 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1771 Mibi-ChrMibi06 38326860 38330978 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1771 182 314 G2-like Transcription Factor Family AT4G13640 59.864 5.52e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi06g1771 Myb_DNA-binding 4.3e-06 CL0123