Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1759 ATGGCGAGCAGAAAGGAAGATGAGAAAAATGAGAAGATTATTAGAGGTCTTATGAAGCTTCCTCCTAATCGAAGATGTATGAACTGCAATAGTCTGGGTCCGCAGTATGTTTGTACGACTTTTTGGACCTTCGTTTGCATGACATGCAGTGGGATACACCGTGAGTTTACTCATCGAGTTAAGTCTGTATCAATGGCAAAATTCACTTCGCAGGAGGTAGAAGCTCTTCAAAATGGTGGCAACCAGCGTGCAAGGGACATGTATTTGAAAGATTGGGATTTCCAAAGGCAGCGTATGCCAGATAGCAGCAATGTTGACAAAATAAGGGAGTTTATAAGGAATGTGTACATTGACAGAAGATATGCTGGAGCAAGGTCCTCTGACAAGCCTCCAAGAGATATGCAGAGTCCTAGAATTCATGGAGATGACACAAGGCGTGCTAGCTCTTACCATTCATATTCCCAGAGTCCTCCGTATGATTATCAATATGAAGATCGACGATATGGAAGACCAGCTGCATTGACTAGGAAGCCTGGTTCAGATAAAGGTCGCTATGAAGGGAAGATGTCTAATATTATGTATAGCCCTGGGCGCTTCAGTGACCACGCATCTGAGGATGGCTTTGCCAATGAGGGATCTGGTCCAAGAATTTCAGACTACTCTGTGTCTAGTGCTGGTGAACAGTTCAAATCTGCTGTGCATTCTCCTAAGTTTTACAGGGACATGCGAAGCAGTCCATTCCATCAGCGTTCTAGTGCTGGTTCAAGTGAAGATGTATGGTCTCCATCACGTTACACATCTCTGGAGACAATTGTGAAGGGTGATTCTGATGGACATCATCCACAGGGATCAACTGTCGGCAATCCACCTGCTCATAGATCTTTCAGTTCTGGTGGTTTAGATTTATTTTCAGAGCCTGCCCAAGCTTCTGGATCCAATCAAGATAAGGTGTCTGCCATACCGGTATCACAACAATCATGTCCAGCAAGATCGGGTAGCTTGGATCTTTCAAAAGCAGCAGTTGCATCTGAGCCATTGTCCTCCTTAACACCAGCTATTGATCTTTTTCAGTTTCCAGCATCATCTCAGCCCTCATCAGTGGATTTGTTTCAACCATCTATTTTGTCTTCAGCTCCTTCGAATGAAAATCAACCTTCACAAACAACCCAGCCGTCATCTGTTGACTTCTTTGCAGATGTTTCTAAGCTGCAGCCTGCTGCTCCATCAGATGAGAAGTCCCCAGAGTTCTTTGTCCCTAAAAATGAAGGGTGGGCAACATTTGATATCCCTCAGCACGCAGCATCTCCTGCACAAGTTGAAATACCAGCAGGAGGTCCTTCAACTGAGAAGTCTTTGCTGGATTTATTTGATCCATTTTCAACTGCAAATGCCAGCAAGCCGTGGCCATCTTTTGACAGTTCTGGTGTTCATGAGCCTTCTATCACTTCTAATGCGTGGCATGGAGGTGTGCAGAATGCAGAACAAGCTTCCATTACCGCAGCAAATGCTCAACCATGGAATGCATTTGGAGATTCTGGTCCCCACCTTCCTGCAGATGCTGGTAACCAAGGGTTGCAACTGCATAATCCTCCATCAAGTGGTGATCAATTTTTAAGCTCAAATGTTTCTGAGGGTTTGAAAGGTGTGGTGCCAGACTTTTCCCCAATTGGCGCGTTCAATGATAATATTCAATCAGATGTTAGTGGTTTACCGTACCCTCCAACTGTGCTTCCTCTAATGGAAGAGACTCAACACCATGCAACCAACCAGAAATCAACTAATCCATTTGATCTCCCCTATGAATCTGATGTAGAGCACAACAATATGTTCCTTGATCTGAGCTCATTGCAAGCTGCTCTGCCAGATTCCCAGTTGGCTCCTCCTTACTATGATGGTAATGTTATAGCTGAACCATGGCTCCCGCAAAATGTGACCCCATATGTTTCTTCTGCAGGACAAGGTGGTCTAACGTTCATGGCTGCGCAGCCACCAAGCTCTCAAATACCGAACATCCAGACGCAAGGACCAGTTGCATCTTTTGGGGGCAATCCTTTTGCATAG 2061 0.4508 MASRKEDEKNEKIIRGLMKLPPNRRCMNCNSLGPQYVCTTFWTFVCMTCSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDMYLKDWDFQRQRMPDSSNVDKIREFIRNVYIDRRYAGARSSDKPPRDMQSPRIHGDDTRRASSYHSYSQSPPYDYQYEDRRYGRPAALTRKPGSDKGRYEGKMSNIMYSPGRFSDHASEDGFANEGSGPRISDYSVSSAGEQFKSAVHSPKFYRDMRSSPFHQRSSAGSSEDVWSPSRYTSLETIVKGDSDGHHPQGSTVGNPPAHRSFSSGGLDLFSEPAQASGSNQDKVSAIPVSQQSCPARSGSLDLSKAAVASEPLSSLTPAIDLFQFPASSQPSSVDLFQPSILSSAPSNENQPSQTTQPSSVDFFADVSKLQPAAPSDEKSPEFFVPKNEGWATFDIPQHAASPAQVEIPAGGPSTEKSLLDLFDPFSTANASKPWPSFDSSGVHEPSITSNAWHGGVQNAEQASITAANAQPWNAFGDSGPHLPADAGNQGLQLHNPPSSGDQFLSSNVSEGLKGVVPDFSPIGAFNDNIQSDVSGLPYPPTVLPLMEETQHHATNQKSTNPFDLPYESDVEHNNMFLDLSSLQAALPDSQLAPPYYDGNVIAEPWLPQNVTPYVSSAGQGGLTFMAAQPPSSQIPNIQTQGPVASFGGNPFA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1759 686 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Mibi06g1759 686 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Mibi06g1759 686 MobiDBLite consensus disorder prediction 272 331 - -
Mibi06g1759 686 MobiDBLite consensus disorder prediction 122 147 - -
Mibi06g1759 686 MobiDBLite consensus disorder prediction 301 331 - -
Mibi06g1759 686 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Mibi06g1759 686 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Mibi06g1759 686 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Mibi06g1759 686 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Mibi06g1759 686 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
Mibi06g1759 686 PANTHER ARFGAP/RECO-RELATED 1 686 IPR044820 GO:0005096
Mibi06g1759 686 SUPERFAMILY ArfGap/RecO-like zinc finger 10 122 IPR037278 -
Mibi06g1759 686 MobiDBLite consensus disorder prediction 163 184 - -
Mibi06g1759 686 Gene3D Arf GTPase activating protein 1 131 IPR038508 -
Mibi06g1759 686 MobiDBLite consensus disorder prediction 122 222 - -
Mibi06g1759 686 MobiDBLite consensus disorder prediction 373 392 - -
Mibi06g1759 686 CDD ArfGap_AGFG 11 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1759 Mibi-ChrMibi06 38229301 38235427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1759 14 116 C2H2 Transcription Factor Family AT3G07940 31.481 4.35e-10 59.3