Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1758 ATGGGAAGACCTCCTTGCTGTGACAAAGTTGGGATCAAGAAGGGACCATGGACACCTGAGGAGGATATCATCCTTGTTTCTTACATCCAAGAGCATGGCCCTGGAAATTGGAGATCAGTGCCTACTAATACTGGGTTGTCAAGGTGCAGCAAAAGCTGCAGGCTGAGATGGACTAACTACCTCAGGCCAGGAATCAAGAGAGGGAACTTCACACCTCATGAGGAAGGAATGATAATTCATTTGCAGGCTCTCCTGGGAAACAAATGGGCAGCCATAGCTTCATACCTACCACAAAGAACAGATAATGATATAAAGAATTATTGGAACACACACTTAAAGAAGAAGCTGAAGAAAATTCAAGCAGCCTTGGATCCACTGGACTCATCAACCAATATCTCTGCTCAGTTTGTATCTAAGAGCTTCCATGACAGAACAAGTTTAGATATGAGCAACAACACTTCATCATCTCTCAGGCTTAGCCAGTCTCATCAGTCTCAGTCTCAATCTCAGTCTTCCTTCTCCACTACCTATGCCTCAAGCACAGAGAACATCTCACGCCTCTTACAAGGTTGGATGAGATCATCACCGAAACAAGACAACAACAAAGAACTTCAAAACAACAACAACCTTAACAGCTTCGAAAACAGTAAGCCAATGATGATGATGAAGTCTGCATCAGTACCTGCTGCTTTAAATTCTGTATCCTATCATCATCATGAAGAAGAAGCAAAAGATGAGAAAGAGGGTGGTGGTGGTGGTGGTGATATGGTGTCTCATGAGGAGTTTGATTCTATTATGTCGTTTGAGAACCTAAACAATGCTACTTGGGACAAGTCAACTAGTGATTCTGAGGCTAATGAAGCAGAGAAGGTTCATGATAGCAATAAGCAGAGATCAGATAGCAATAATAGTGCTCCTCCATTGTCTTTTCTTGAGAAGTGGCTGTTTGAGGAAAATGTGGGCCATGAGGAGATGATGGAACTATCCCCTATGTTCTAA 999 0.4274 MGRPPCCDKVGIKKGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYLRPGIKRGNFTPHEEGMIIHLQALLGNKWAAIASYLPQRTDNDIKNYWNTHLKKKLKKIQAALDPLDSSTNISAQFVSKSFHDRTSLDMSNNTSSSLRLSQSHQSQSQSQSSFSTTYASSTENISRLLQGWMRSSPKQDNNKELQNNNNLNSFENSKPMMMMKSASVPAALNSVSYHHHEEEAKDEKEGGGGGGDMVSHEEFDSIMSFENLNNATWDKSTSDSEANEAEKVHDSNKQRSDSNNSAPPLSFLEKWLFEENVGHEEMMELSPMF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1758 332 MobiDBLite consensus disorder prediction 236 254 - -
Mibi06g1758 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Mibi06g1758 332 Gene3D - 69 135 - -
Mibi06g1758 332 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mibi06g1758 332 MobiDBLite consensus disorder prediction 145 177 - -
Mibi06g1758 332 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi06g1758 332 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mibi06g1758 332 FunFam MYB-related transcription factor 13 66 - -
Mibi06g1758 332 Gene3D - 13 66 - -
Mibi06g1758 332 MobiDBLite consensus disorder prediction 236 258 - -
Mibi06g1758 332 MobiDBLite consensus disorder prediction 282 297 - -
Mibi06g1758 332 SMART sant 66 114 IPR001005 -
Mibi06g1758 332 SMART sant 13 63 IPR001005 -
Mibi06g1758 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 240 - -
Mibi06g1758 332 MobiDBLite consensus disorder prediction 194 215 - -
Mibi06g1758 332 CDD SANT 16 61 IPR001005 -
Mibi06g1758 332 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi06g1758 332 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi06g1758 332 MobiDBLite consensus disorder prediction 273 309 - -
Mibi06g1758 332 CDD SANT 69 112 IPR001005 -
Mibi06g1758 332 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1758 Mibi-ChrMibi06 38222643 38223996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1758 1 119 MYB Transcription Factor Family AT5G62470 90.756 1.46e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g1758 Myb_DNA-binding 1.7e-15 CL0123