Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1743 ATGGCCACTTCACAAAACTTCAACAATGGGGGTGGTGGTGTTTTAAGTGGGGACGTCAATCTTTTACCCCCAGTTCCTTCTTATGCTTCCCTTCTTCTGGTTCGATCTCCCCAACTTTCACTGTCAAACACTAGCGAGATTGGTTTTCAGATTCTGAGCCCTTCATTTTCGACCCAAGAGAACAGGGGAACAATGAGAGGCCACGGTGAAGCTGATGGAACTTCAGGGGATAAGATAAACAACACGCCTTTCAAACTTGGGGAAGATGACATTGAAGCTGAGAGATCTTCTGGGTCGAGAAATGGACACACAAAGCTCTGTGCTAGAGGCCATTGGAGGCCTGCTGAAGATTCCAGACTCAGAGAGCTCATTGCTCAGTACGGTCCTCAAAATTGGAACTTGATCGCCGACCACCTTGAAGGAAGATCAGGGAAAAGTTGCAGACTTAGGTGGTTCAATCAGCTTGATCCCAGAATTAACAGGAGGTCTTTCTCTGAGGAAGAAGAGGCTAGATTGTTGTCTGCTCATAGAATGTACGGGAACAAATGGGCCATGATTGCCAAACTGTTTCCTGGGAGGACAGATAATGCAGTGAAGAATCACTGGCATGTGATAATGGCAAGGAAGCACAGAGAGCAATCAAGTGATTGTAGAAGGAGGAGGTCGTCTTCTGAAATCATCCGTCCAAAGGATTTAAATTTGAGTCTCTCAAATAATGCAGTGAGCGAATCTACTAACTCAAGCAATCTCATAAATGAATCTGCTTCATCCTCCACTGATCTCTCCCTCAGCCCCTCATTTTCCCCAAACCCAAGTCCTCAAGGCCAGGGATCGCTGTTGGGTCTGTGCGATGAGATGAAGTTGAGATCTGGGGATGTGAGATTCGAAGGGTTGTTTGTGGGTTGGAGGGGGGGAGGAGCACAAATGGGGAAGGTGATGGTGGGTGTAGTGGAACAATCAAATTCAGATTCAAACTCGGAAATATCAGTATCTGAGTCAGTGGCTACAAACAGGACGAAGCTCTCACTTTGTGGGGAAAGTGAGAAAGTGGGGGATAATATGAGTATGCCATTTATTGATTTTCTTGGAGTAGGAGCTATATGA 1104 0.4611 MATSQNFNNGGGGVLSGDVNLLPPVPSYASLLLVRSPQLSLSNTSEIGFQILSPSFSTQENRGTMRGHGEADGTSGDKINNTPFKLGEDDIEAERSSGSRNGHTKLCARGHWRPAEDSRLRELIAQYGPQNWNLIADHLEGRSGKSCRLRWFNQLDPRINRRSFSEEEEARLLSAHRMYGNKWAMIAKLFPGRTDNAVKNHWHVIMARKHREQSSDCRRRRSSSEIIRPKDLNLSLSNNAVSESTNSSNLINESASSSTDLSLSPSFSPNPSPQGQGSLLGLCDEMKLRSGDVRFEGLFVGWRGGGAQMGKVMVGVVEQSNSDSNSEISVSESVATNRTKLSLCGESEKVGDNMSMPFIDFLGVGAI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1743 367 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Mibi06g1743 367 SMART sant 160 208 IPR001005 -
Mibi06g1743 367 SMART sant 108 157 IPR001005 -
Mibi06g1743 367 MobiDBLite consensus disorder prediction 238 277 - -
Mibi06g1743 367 ProSiteProfiles Myb-like domain profile. 109 155 IPR001005 -
Mibi06g1743 367 FunFam MYB transcription factor 109 160 - -
Mibi06g1743 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 156 210 IPR017930 -
Mibi06g1743 367 PANTHER MYB PROTEIN-RELATED 109 252 - -
Mibi06g1743 367 Gene3D - 162 230 - -
Mibi06g1743 367 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 155 IPR017930 -
Mibi06g1743 367 MobiDBLite consensus disorder prediction 238 280 - -
Mibi06g1743 367 SUPERFAMILY Homeodomain-like 109 202 IPR009057 -
Mibi06g1743 367 Pfam Myb-like DNA-binding domain 161 204 IPR001005 -
Mibi06g1743 367 Pfam Myb-like DNA-binding domain 109 155 IPR001005 -
Mibi06g1743 367 CDD SANT 112 153 IPR001005 -
Mibi06g1743 367 MobiDBLite consensus disorder prediction 58 85 - -
Mibi06g1743 367 Gene3D - 109 160 - -
Mibi06g1743 367 CDD SANT 163 203 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1743 Mibi-ChrMibi06 37881905 37883197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1743 108 367 MYB Transcription Factor Family AT1G69560 45.000 2.42e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi06g1743 Myb_DNA-bind_6 4.8e-15 CL0123