Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1725 ATGCCCTCGCCGAACCAGAGCATTTTGGTCTCTCCCTCTAGCTCCCGCTCGGTGACGGAGACCGTAAATGGTTCTCACAACTTCGTAATCAGAGGTTACTCTCTTGCCAAAGGGATCGGCGTTGGCAAGCACTTAGCCAGCGAGAATTTCACGGTCGGAGAGTACCAGTGGGCTATATATTTCTATCCTGATGGCAAGAATCCTGAAGATAATTCTGCCTATGTTTCGGTTTTCATTGCCCTTGCTAGCGAGGGTACCGATGTAAGAGCACTTTTCGAGCTCACTTTGGTGGACCAAAGCGGAAATGGAAAACATAAGGTTCATAGCCACTTCGATCGTTCGCTCGAGAGTGGTCCTTATACGCTCAAGTATAGAGGCAGCATGTGGGGCTATAAACGGTTTTTCAAACGAGCTCAGCTTGAGGCATCTACCTTCCTTAAAGATGACTGCTTGAAGATAAATTGCACTGTTGGTGTTGTAGTCTCGTCCATAGATTGTTCAAAATCAAACAGCATACAGGTTCCTAAATCTGATATTGGAGCACATCTTGGCACGCTATTAGAGAATGAGGAAGAAGCAGATGTCGTTTTCTCTGTTTCTGGGGAAAAATTTCGTGCGCATAAGCTTATATTAGCTGCTCGATCTACTGTATTTGAGAATGAAGTGTTCAACGATATGGATGGGGATTGTAAAGAGATAGTTGTTACTGACATGGAACCCAAGGTTTTCAAGGCATTGCTTCACTTTATTTATAAAGACACTCTTATGGAAGATGAAGAGCTCTTTATGTCACGATCATCGTTTTTGCCATCAGTATCTGACACATTTGCCGCAAAATTGTTAGCTGCAGCAGAGAAGTATGAGTTGCCAAGACTCAAACTGATGTGTGAGTCTGTACTTTGCAAAGACATTTCTGTAGATTCTGTTTCTTATATGCTGGCCCTTGCTGATCATTATCATGCGACTGAGCTGAAGTCCATTTGTCTAAAATTTTCTGCTGAAAACCTTGTTGCTGTGATGCAATCTGATGGTTTCGAGTATCTTAAGGAGAATTGTCCATTGCTACAATCAGAACTACTAAAGACAGTAGCAGGGTGTGAGGAGGAATTTAGTGGAGAAGGAAAATGCCGAAGTGTGTGGGCCCAATTCTCAGACGGTGCTGATACAAATGATAAAAGTGTGAGACAAGAAACCTGGGAAAATGGTGTTGAACGAAATCAAGGTATATGGGTTCAGCTTTCTGATGGTGCTAACAATGATAGGAGTCCAGGGCAAGAAGCTTGA 1284 0.4322 MPSPNQSILVSPSSSRSVTETVNGSHNFVIRGYSLAKGIGVGKHLASENFTVGEYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLVDQSGNGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASTFLKDDCLKINCTVGVVVSSIDCSKSNSIQVPKSDIGAHLGTLLENEEEADVVFSVSGEKFRAHKLILAARSTVFENEVFNDMDGDCKEIVVTDMEPKVFKALLHFIYKDTLMEDEELFMSRSSFLPSVSDTFAAKLLAAAEKYELPRLKLMCESVLCKDISVDSVSYMLALADHYHATELKSICLKFSAENLVAVMQSDGFEYLKENCPLLQSELLKTVAGCEEEFSGEGKCRSVWAQFSDGADTNDKSVRQETWENGVERNQGIWVQLSDGANNDRSPGQEA 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1725 427 Gene3D Potassium Channel Kv1.1; Chain A 168 298 IPR011333 -
Mibi06g1725 427 ProSiteProfiles BTB domain profile. 193 259 IPR000210 GO:0005515
Mibi06g1725 427 SUPERFAMILY TRAF domain-like 20 162 - -
Mibi06g1725 427 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 14 360 IPR045005 GO:0016567
Mibi06g1725 427 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 22 161 IPR008974 GO:0005515
Mibi06g1725 427 SUPERFAMILY POZ domain 172 302 IPR011333 -
Mibi06g1725 427 FunFam BTB-POZ and math domain 1 169 298 - -
Mibi06g1725 427 CDD BTB_POZ_BPM_plant 179 301 - -
Mibi06g1725 427 SMART BTB_4 193 304 IPR000210 GO:0005515
Mibi06g1725 427 CDD BACK_AtBPM-like 301 362 IPR034090 -
Mibi06g1725 427 SMART math_3 28 140 IPR002083 GO:0005515
Mibi06g1725 427 Gene3D - 303 377 - -
Mibi06g1725 427 Pfam BTB/POZ domain 185 302 IPR000210 GO:0005515
Mibi06g1725 427 CDD MATH 24 157 IPR002083 GO:0005515
Mibi06g1725 427 ProSiteProfiles MATH/TRAF domain profile. 23 157 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1725 Mibi-ChrMibi06 37657306 37666564 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mibi06g1725 BTB 8.3e-24 CL0033