Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1720 ATGGCCAACCAATTCCACACTTCGTTGCTTCTGTTTTTAATAACAGCTTTACTTTCTATCTATGATTCGGAGCAGCTTCAATCTTCCCAGTTTGATGCCCTCATGAACATCCAAAAAGATTTGAACTTTCCTTCTGCTTTAAGCGGCTGGAATTATCACACAGACTTCTGCAACGCAGATTCGAATTCTTCTTCCACTGTTATGTGCTATGAAGATACCATAACCCAGCTTCATATAATAGGTGAAGCAAGAGATTCCCTCCTTCCTCGAAATTTCTCAATAGATTCATTTTTCCAAACACTGGCAAGACTTCCCAATTTGAAAGTCCTTACTTTGGTTTCTCTTGGTATATGGGGTCCATTGCCAGCCAGAATTTCTCACTTGGCATCACTGGAAATAGTTAACATGAGCTCTAACTGCTTATATGGGGCCATACCACAAGAGCTCTCTTCACTTTCCGATCTTCACACTCTTATTCTTGATGATAACATGTTGGCTGGTCAGTTACCTGATTGGATGGATTCGTTTCCAGACTTAACCGTGTTGAGTTTGAAGAACAATAAGTTCAATGGATCTTTGCCTAAATCATTGGGTAGCTTGGAAAATCTTAGGATTCTTTCACTTTCTCATAATCACTTATATGGAATGGTACCTGATTTGAGCCGTTTAAAAAATCTTGAAGTTCTGGATTTGGATAGTAATGCTCTTGGGCCTCAGTTTCCTCAACTCGGTACGAAGTTGGCCACTCTTATACTAAGGAACAATAGCTTCAGGTCTGGTATTCCTTCTGAAGTTACCTCTTATTACCAGCTTGAGAGATTGGATATCTCATTGAATACATTTGTGGGGCCATTTCTGCCAGCCTTGTTGTCTCTTCCTTCAATTACTTATCTCAACATTTCAGGGAACAAATTAACTGGGATGGTTTTTGAGAATATGTCCTGCAATTCAGAACTTGAAGTTGTGGATTTGTCCTCAAACCTTTTGACAGGAAAATTACCCAAATGTTTAGTGTCAAATTCCAGTGATAGAACGGTGAAGTATTCTAGAAATTGTCTCGATGGTGCGGATCAGAATCAGAACCCATCACCCTTTTGTCACACTGAGGCCTTAGCTGTGGGGATTTTACCTGAGAGAAAGAAGCACAAAGGATTGTCCAAGTTAGTCCTTTCCATTGGAATAGCAGGTGGAGCTGTAGGAGTTGTTGCGCTTGTTGGACTTATTGTCTTTCTTATTAAAAGAGGAAATGCCAAAAGCCAGAGTAAGAACCCTCCAGTAAGATTTATAACAGAGAATGCTGCTTCTGGATACACCTCTAAGTTGCTTTCTGGTGCAAGGTATATATCTCAAACAATGAAGTTGGGAGCCGTTGGTTTGCCAACTTATAGAACTTTCTCACTGGAGGAGATTGAGACTGCCACAAACTACTTCAACACAGCTTCTTTGATGGGTGAAAGTTCTCATGGGCAGATGTATAGAGGTCAGTTGAAGAATGGTTCAGTTGTGGCCATTAAGTGTGTACAAATAAGAAAAGGTTATAGCACACAAAGCTTTATGCAGCAGATAGAGCTGGTATCAAAACTCAGGCATCTTCATTTAGTCAGTGCTCTTGGACACTGCTTTGAATGTCATTTAGATGATTCAAGTGTCAGCAGAATATTCTTTGTCTTTGAATACGTACCAAATGGCACGCTCAAGAGCTGGATCTCTGACGCGAATTCTTCAAATTCACTTGGTTGGATTCAACGCATAGCAGTTGCTATTGGAGTAGCAAAGGGAATCCAGTTTTTGCATACTGGGATTCTCCCTGGCGTGTATTCAAGCAATCTCAGAATAACAGATGTTTTATTGGACCAGAACCTCGTTGCAAAAATATGCACCTATAACCTGCCTTTGTTATCAAACTTGGGAAAGGCTGGCCATGGAAACTCTTCCAGCAAATCCAAAAGTCCTAAAGTTAACAAAAGTAATAAACATGAAGATAAGTCTGATATATACGACTTGGGGGTCATACTATTGGAACTCATCTTCGGAAGGACAACGAAGTCAAAGAATGATGTGGACACCTTAACTAAACTGTTGCAAGCAAGCATAGTAGCAGATGACGATGCACGGAGAAGCGTGGTGGATCCTGCGATTCAAAGGGCGAGCTTGGATCAATCACTGAAGACTATGATGGAAGTTTGTGTGAGATGTGTGGCTAAAGAAGAAGAAGAAAGGCCTTCCATTGAGGATGTGTTGTGGAATCTGCAATTTGCTGCACAAGTTCAGGACTCATGGAGATTGGACTCTAGAAGTAGTAGTGATTGGTCTCCTGGCTCTCCTTCTTCAGACCCTGCAAGACTCGCCTTCCATTAG 2358 0.4109 MANQFHTSLLLFLITALLSIYDSEQLQSSQFDALMNIQKDLNFPSALSGWNYHTDFCNADSNSSSTVMCYEDTITQLHIIGEARDSLLPRNFSIDSFFQTLARLPNLKVLTLVSLGIWGPLPARISHLASLEIVNMSSNCLYGAIPQELSSLSDLHTLILDDNMLAGQLPDWMDSFPDLTVLSLKNNKFNGSLPKSLGSLENLRILSLSHNHLYGMVPDLSRLKNLEVLDLDSNALGPQFPQLGTKLATLILRNNSFRSGIPSEVTSYYQLERLDISLNTFVGPFLPALLSLPSITYLNISGNKLTGMVFENMSCNSELEVVDLSSNLLTGKLPKCLVSNSSDRTVKYSRNCLDGADQNQNPSPFCHTEALAVGILPERKKHKGLSKLVLSIGIAGGAVGVVALVGLIVFLIKRGNAKSQSKNPPVRFITENAASGYTSKLLSGARYISQTMKLGAVGLPTYRTFSLEEIETATNYFNTASLMGESSHGQMYRGQLKNGSVVAIKCVQIRKGYSTQSFMQQIELVSKLRHLHLVSALGHCFECHLDDSSVSRIFFVFEYVPNGTLKSWISDANSSNSLGWIQRIAVAIGVAKGIQFLHTGILPGVYSSNLRITDVLLDQNLVAKICTYNLPLLSNLGKAGHGNSSSKSKSPKVNKSNKHEDKSDIYDLGVILLELIFGRTTKSKNDVDTLTKLLQASIVADDDARRSVVDPAIQRASLDQSLKTMMEVCVRCVAKEEEERPSIEDVLWNLQFAAQVQDSWRLDSRSSSDWSPGSPSSDPARLAFH 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1720 785 MobiDBLite consensus disorder prediction 639 660 - -
Mibi06g1720 785 Gene3D Ribonuclease Inhibitor 244 368 IPR032675 -
Mibi06g1720 785 Pfam Leucine rich repeat 155 213 IPR001611 GO:0005515
Mibi06g1720 785 SUPERFAMILY L domain-like 47 354 - -
Mibi06g1720 785 Pfam Protein tyrosine and serine/threonine kinase 481 747 IPR001245 GO:0004672|GO:0006468
Mibi06g1720 785 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Mibi06g1720 785 MobiDBLite consensus disorder prediction 763 785 - -
Mibi06g1720 785 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Mibi06g1720 785 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1720 785 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 766 - -
Mibi06g1720 785 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Mibi06g1720 785 Gene3D Phosphorylase Kinase; domain 1 444 559 - -
Mibi06g1720 785 SUPERFAMILY Protein kinase-like (PK-like) 459 752 IPR011009 -
Mibi06g1720 785 CDD TM_EGFR-like 386 414 - -
Mibi06g1720 785 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Mibi06g1720 785 Gene3D Ribonuclease Inhibitor 27 243 IPR032675 -
Mibi06g1720 785 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1720 Mibi-ChrMibi06 37629884 37633110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1720 43 782 Miscellaneous Gene Families AT3G03770 59.572 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Mibi06g1720 PK_Tyr_Ser-Thr 2e-23 CL0016