Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1682 ATGGATGTTTGCCGGAATGCTTCAGTTGCCGGCGACTGTGAACAAGAGAAGGTCCTCTTGTCCTCCCGCTCAAAGCTTTCTACCATCTCAACCACTCTTGACGACCTCTTCTCTTCTCATAACACGGAAGTGGATGTTGGCTTAGAATGGCTTTCTGTGTTTGTGGAAGACTGTTTTTCCAGCTCAGCATGTTGCCTCTTGGCGCCTACCGATGCTCAAAACACAGAGGCAAACTCTAAACCCTCCGTACAATTACAGAGAACCCAGCAAAAGCAGTCTCCTCTGCAAAATTTTGTGGTGCCACCAGGAAAGGCAAGAAGCAAGAGGAAAAGGCTTTCAGCACCTAGAACCAACAACCCATTAAGCAGCTGGTCACACCATTTGAACCCACGAAATGAACCCATAGCTTCAGACCCTCCTCTTCTTAAACAAGCCTACTGGCTAGCTGATAGTGAACTAATGGTACCCAAAAAGGAAGATGAGCATGTTACAACAGAGGATGAAAAAGCAGGGCAGGAGGTGGAAGTGAAGAGGACTGTGAGGAAGAAGGGGAGTTTTGAGAGCTTAGTCTCAGAGTGTGAAGATGGTATCATTGGACAGAATCAAATGGCAAGAAGGTGCACCCATTGCCTTGCACAGAGGACCCCACAATGGAGGGCCGGGCCATTGGGTCCAAAAACACTATGTAATGCATGTGGAGTGAGGTACAAGTCTGGTAGATTGCTTCCAGAATATAGGCCAGCCAAGAGCCCCACTTTTGTAAGCTATTTGCACTCCAATTCCCACAAAAAGGTCATGGAGATGAGAATGGCTGTTCTTTCTCCTGTTCCTAGTGAGGACTAA 843 0.4745 MDVCRNASVAGDCEQEKVLLSSRSKLSTISTTLDDLFSSHNTEVDVGLEWLSVFVEDCFSSSACCLLAPTDAQNTEANSKPSVQLQRTQQKQSPLQNFVVPPGKARSKRKRLSAPRTNNPLSSWSHHLNPRNEPIASDPPLLKQAYWLADSELMVPKKEDEHVTTEDEKAGQEVEVKRTVRKKGSFESLVSECEDGIIGQNQMARRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVLSPVPSED 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1682 280 MobiDBLite consensus disorder prediction 114 130 - -
Mibi06g1682 280 FunFam GATA transcription factor 199 276 - -
Mibi06g1682 280 ProSiteProfiles GATA-type zinc finger domain profile. 201 237 IPR000679 GO:0006355|GO:0043565
Mibi06g1682 280 MobiDBLite consensus disorder prediction 75 97 - -
Mibi06g1682 280 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 203 265 - -
Mibi06g1682 280 SMART GATA_3 201 255 IPR000679 GO:0006355|GO:0043565
Mibi06g1682 280 PANTHER GATA TRANSCRIPTION FACTOR 17 273 - -
Mibi06g1682 280 Pfam GATA zinc finger 207 241 IPR000679 GO:0006355|GO:0043565
Mibi06g1682 280 Gene3D - 198 268 IPR013088 GO:0006355|GO:0008270
Mibi06g1682 280 MobiDBLite consensus disorder prediction 75 132 - -
Mibi06g1682 280 CDD ZnF_GATA 206 253 IPR000679 GO:0006355|GO:0043565
Mibi06g1682 280 ProSitePatterns GATA-type zinc finger domain. 207 232 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1682 Mibi-ChrMibi06 37325054 37326170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1682 21 269 C2C2-Gata Transcription Factor Family AT4G32890 37.743 2.91e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mibi06g1682 GATA 1.2e-14 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi02g0772 02 7485624 7486824 Mibi06g1682 06 37325054 37326170 CCT