Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1677 ATGGAAGAACCGGTCGTTGTGAACAAAGTGGAAGATCAGCCTCTGGATTTGCCTCCTGGATTCAGATTCCACCCCACCGATGAAGAGATCATCACTTATTATCTCACCGAGAAGGTCCTCAACAGCAATTTCAGTGCAACTGCCATAGGAGAAGCCGATTTGAACAAGTGCGAGCCTTGGGACTTGCCCAAGAAAGCGAAGATGGGGGAGAAAGAGTGGTACTTTTTCTGCCAAAGGGATAGGAAGTATCCGACGGGGATGAGGACAAATCGGGCCACCGAATCTGGTTATTGGAAGGCCACTGGAAAAGACAAGGAGATTTACAAAGGCAAAGGCAACCTTGTTGGCATGAAGAAGACCCTTGTTTTCTACCGAGGTAGAGCCCCTAAGGGAGAGAAAACCAACTGGGTTATGCATGAGTTTCGCTTGGAAGGCAAATTCGCCTCTTTCAATCTCCCCAAAGCTGCCAAGGATGAATGGGTAGTGAGCAAGGTGTTTCACAAGAACTCAGATGTTAAAAAGAACCAAATTCAAGGACTTTTGAGGATAAACTCATTGGGTGATGATTTACTTGACTGCTCATCCCTCCCTCCTCTCATGGACCCTTCCTTCAAACCCACCAACCCATCCCCACCGCCCAAACCATCCGACGGCTATTACATCCCCAACCTCTCCATCATCAACAACAATAATCAGCAACCTCAGCAGCTCATGATGAAGCCCCAACACATGATGACATCATCCAACAACAATTACACCATCAATCACCCCAATCCCAATTTCATCACTCACCCTCAGATTCATCAAGCCCAAAATCCCACCACCACCACCTTCTCATTCCAACAGATCAACAATAATAATAATCAAGGTGGTAATTATGTGAGTGATCAGCAGCAACAGGCTTTTCTGAGATCATTCGCTGCGGGGAATCATCAAAACGACGTCCGTTCGTATGGGTTGGACAGAATCTGCAAAACGGAGCCGTTGGTAGTGTCGTCTTCGGGTAACCAATCAATGGTGAGCGCGTCACAGGACACGGGAGCTAGTAACGACAGGAACACCGACACTTCCTCTGCCGTTTCGAAGCTTCACATGGGAAAGAACAAAGCATTGTACGATGATCTTGAGCCTCCTTCCGCTGGGCCCCTCTCTGATTTGGATTGCCTCTGGGATTATTAA 1179 0.4767 MEEPVVVNKVEDQPLDLPPGFRFHPTDEEIITYYLTEKVLNSNFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFASFNLPKAAKDEWVVSKVFHKNSDVKKNQIQGLLRINSLGDDLLDCSSLPPLMDPSFKPTNPSPPPKPSDGYYIPNLSIINNNNQQPQQLMMKPQHMMTSSNNNYTINHPNPNFITHPQIHQAQNPTTTTFSFQQINNNNNQGGNYVSDQQQQAFLRSFAAGNHQNDVRSYGLDRICKTEPLVVSSSGNQSMVSASQDTGASNDRNTDTSSAVSKLHMGKNKALYDDLEPPSAGPLSDLDCLWDY 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1677 392 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Mibi06g1677 392 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Mibi06g1677 392 MobiDBLite consensus disorder prediction 331 358 - -
Mibi06g1677 392 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 285 - -
Mibi06g1677 392 FunFam NAC domain-containing protein 100-like 26 172 - -
Mibi06g1677 392 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Mibi06g1677 392 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1677 Mibi-ChrMibi06 37281706 37283281 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1677 1 215 NAC Transcription Factor Family AT5G18270 72.197 3.58e-114 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi06g1677 NAM 2.3e-40 No_clan