Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1674 ATGGCTAGCCCACAATCCCATTTACCTCCTGGCTTCAGGTTTCACCCTACTGATGAAGAACTCATCCTTCACTACCTCAGGAAGAAGGTCGCCTCTCTCCCCATCCCCGTCTCCATCATTGCCGAGGTCGACATCTACAAGTTTGATCCCTGGGAATTACCTGATAAGGCAGCGTTTGGGGATAAAGAATGGTACTTCTTTAGTCCTAGAGACAGGAAGTACCCGAACGGGGCCAGGCCAAACAGGGCGGCAGCTTCAGGGTATTGGAAGGCCACTGGCACTGATAAGACCATTGTGGCGGCGTTGCCAGGAGGAGGATCAACGGAGAGCATGGGAGTGAAGAAGGCTCTTGTTTTCTACACTGGAAAACCACCCAAGGGAACCAAAACTAATTGGATCATGCATGAATATCGCCTCCTTTATAATACCATAAACAGAGCCCCCAAGTTCCAAGATTCCTCCATGAGGTTAGATGACTGGGTTCTTTGCCGGATTTACAAGAAGTCTAAATGTGCTGAGTCTCCCACCACTGCTGAAGCTGAAACCTTGCTCATGGCTGACCAAGATGCCCCAGAAGATCAGCATATACCGTTACCAATCTCTCAATCTCCTTCTCCTCCTCCTCCTCCTCCTCCGACTCAACAGAACAATCTGATTTCTCAGAAATCGTTGTCTTTCTCCAACCTGCAGTTAGATGCCACGGACTTCTCCATGTTGAGCAGCTTCTTATCTGACAACTATCCCAACCCACCTGGGTTTGAATCATCTTTTTCTGCTGCTCCTGCTGACAATAATTCCAACTCTGAAATTATCAATCTGGATTCCCAAAGTACTCATACCAACGACAATTACTTGGTTCAGAGGACACCCCAATTGAACACATCCTCTGTTATGAACATAGGAAACAACAATTACATGAACAAGCGTCAGATTTCGGGGATAGATGAGGATGCTGCCTCGTACCCATCAAAGAGGTATCTCACCTCTTCCTGCAGTTTCCCTAATAATAACAGTACTACCAGCCATCGTCAACTTGACAACCCACAATGGAACTTCCTCCTCAAGCAATCCTTGTTCAACCAGCAGTTACTCCTGGGTCCTCACCTTCGCTTTCAGGGATAA 1122 0.4742 MASPQSHLPPGFRFHPTDEELILHYLRKKVASLPIPVSIIAEVDIYKFDPWELPDKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVAALPGGGSTESMGVKKALVFYTGKPPKGTKTNWIMHEYRLLYNTINRAPKFQDSSMRLDDWVLCRIYKKSKCAESPTTAEAETLLMADQDAPEDQHIPLPISQSPSPPPPPPPTQQNNLISQKSLSFSNLQLDATDFSMLSSFLSDNYPNPPGFESSFSAAPADNNSNSEIINLDSQSTHTNDNYLVQRTPQLNTSSVMNIGNNNYMNKRQISGIDEDAASYPSKRYLTSSCSFPNNNSTTSHRQLDNPQWNFLLKQSLFNQQLLLGPHLRFQG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1674 373 ProSiteProfiles NAC domain profile. 8 168 IPR003441 GO:0003677|GO:0006355
Mibi06g1674 373 Gene3D NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
Mibi06g1674 373 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Mibi06g1674 373 MobiDBLite consensus disorder prediction 193 218 - -
Mibi06g1674 373 MobiDBLite consensus disorder prediction 200 215 - -
Mibi06g1674 373 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Mibi06g1674 373 FunFam NAC transcription factor 56 17 173 - -
Mibi06g1674 373 PANTHER NAC TRANSCRIPTION FACTOR 56 8 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1674 Mibi-ChrMibi06 37259747 37261059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1674 4 373 NAC Transcription Factor Family AT3G04070 49.741 8.59e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi06g1674 NAM 5.4e-40 No_clan