LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g1672	ATGAGACGACCAAGAACCTCGTACGCCGTCATCTTCGATGCAGGAAGTACAGGTAGCCGTGTCCATGTCTTCCACTTCAACCAAAGTCTAGACCTCATTCCCATTGGCAAAGATCTTGAGTTCCTAGACAAGGTTAAACCGGGTTTGAGTGCATATGCTAAGAATCCAGAGAAAGCTGCTGAGTCTCTGACTCCACTATTAGAGGAAGCTGAAAATGTTGTTCCCAAAAGGGCGCGTCCCAGGACTCCCCTCAGACTTGGGGCAACCGCAGGGTTGAGATTTTTGGAAGGGAACGCTTCTGAATTGATCCTGGAAGCGGTTAGGGATATGTTCAAGGAGAAGAGCTCTTTGAAACTCGAGTCTGATGCATCAGTTTCAGTTATTGATGGAACCCACGAAGGCTCTTATCTATGGGTGGCAATAAACTATGTATTGAAGAACTTGGCAAAAGAATATGATGAGACGGTGGGAGTGCTTGATCTGGGAGGAGGTTCAGTGCAAATGGCATATGCGGTGTCAGAGGAAAATGCTGCAAAGGCACCCAACGCAAACGAAGGAGACGATCCTTACATAACCCAAATGTATCTCAAGGGAACCAAGTACTTCGTCTACGTTCACAGCCATGGCTGGTGGGTCAAGCTTCAGGGCATGCAGGAATACAGTGCTGAAGCTTTGAATGTGAACGCCTCATGTGCCCATAAGAACTGCACTTTTGGTGGCATCTGGAATGGTGGTGGCGGCCCTGGCCAGAAAAACCTCTACCTTGCCACTTCTTTCTATTACGCTGGCATTGCTGATATAAACAAGCCGAGCGACAGAATTCGAATGGTAAATTATAAGATAGCAGCACAGCTTGCTTGCAAGACAACACTTGAGGAAGCCAATTCCACCTTCCCACTCTTCCGCCAAACCGATCTTCCATATGTCTGCCTCGATCTTGTCTACCAGTATACTTTGCTTGTCCATGGCTTTGGTCTAGATCCATGGCAAGAAGTGACCGTGGTGAATAAGCTTAAGTATAAGGATTATTTAATAGAAGCAGCTTGGCCATTAGGCACGGCCATTGAAGCAGTTTCAGCTTTGCCCACATTTGATCGGCTTTTCCATATCGGCATATCCTATGAGGTGAGGGGAGTGGTAACTAGAAGCATGGAGTGGCGAGTGGGAGTAGTATGGATATGTTGCCTGTTGTTGGTGTGGGCGGCGCCGCCTTGCCATGGGGTGGCGCACCGGAAATTCGGGTCTCTCCTCCGCCACAAAGTCACCGGAATCAGTAGTAATAGCTCATCGAGCAACTCAACATACGCAGTGATTTTGGACAGTGGTAGCACTGGGACTCGCATTCATGTGTACCGTTTCAACCAAAGCACACAACTTCAATACATCGACGATGGTTTTGAATACGTCTACAAGGTGACGCCGGGGCTGAGTTCTTACGCAAGTAATCCGGAGGGGGCGGCGGAATCGGTGATGGCTTTGTTGGAGAAGGCGGAGGCTGTTGTGCCGGAGGAGTCTCAATCCTCCACACCCCTCAGGCTTGGCGCTACAGCGGGTTTGAGATCCTTGGACTCCAATACTTCCGAACTCATCTTGGAGGCCATCTGGGAAGTGGTGAAGAGCAACACTTCATTTGCGCTGGAGTCTGATGATTCAATTGCCGTTCTTAGCGGAAACCAAGAGGGATATTATCTATGGGTGACGGTGAACTATCTGTTGAATAAGCTGGGAGAAGAGTATTCAAACACGATAGGAGTGGCAGATCTTGGAGGTGGCTCCGTCCAAATGGCCTATGCCATCTCCGAGGACGTAGCCTCCAATGCTCCTGCTTACGCCCCCAACGGAGACGCTTACGTCACCAAGATTTCCCTCGGTGGATCCACTTACCACATCTACGTTCACAGTTACTTGAACTTTGGTAAGGAATCGTCACGTGCGGCCATCTTAAACCTCACCGGTGATTCTGACAACCCTTGTGTTTTAACCGGCTTCAATGGGACGTACGAATACAGTGATGTGGAGTACAAAGCGTCGGCGCCGGCGAATGGGTCAAGCTACGATGAATGCAGGAACACAGTATTGAAGCTGTTCGATTTTAACGCCACCTGTGCCCATAAGAACTGTACCTTCGCCGGCGTTTGGAACGGCGGCGGAGGCGCAGGCCAGTCCAAACTGTACCTTGCCACCTCTTTCTATTACCTTGCTGTTGAAGCGGGTTTTGCTGACTACAACGCAACAATCAGCAAGGTTCGGCTGATAGACTATAAGATAACGGCGGAGCTAGCTTGTAAGACAACATACGAGGAGGCCAAAACAGTTTTCCCCAACATGGACGAAGATGTGCTTGCATATACCTGCATGGATCTCGTTTACCAGTACACCTTGCTCGTCGATGCTTTTGGGTTGGATCCGTGGGAGGTGGTGACGGTGGTGAACGAGATAGAGTATGAGGGTTCACAGTTGGATGCATCGTGGGCACTGGGCAGCGCCATTGAGTCTGTTTCTTCTCTATCTTCCTACCGACGTTTAATGTACGTCCAGTGA	2541	0.4955	MRRPRTSYAVIFDAGSTGSRVHVFHFNQSLDLIPIGKDLEFLDKVKPGLSAYAKNPEKAAESLTPLLEEAENVVPKRARPRTPLRLGATAGLRFLEGNASELILEAVRDMFKEKSSLKLESDASVSVIDGTHEGSYLWVAINYVLKNLAKEYDETVGVLDLGGGSVQMAYAVSEENAAKAPNANEGDDPYITQMYLKGTKYFVYVHSHGWWVKLQGMQEYSAEALNVNASCAHKNCTFGGIWNGGGGPGQKNLYLATSFYYAGIADINKPSDRIRMVNYKIAAQLACKTTLEEANSTFPLFRQTDLPYVCLDLVYQYTLLVHGFGLDPWQEVTVVNKLKYKDYLIEAAWPLGTAIEAVSALPTFDRLFHIGISYEVRGVVTRSMEWRVGVVWICCLLLVWAAPPCHGVAHRKFGSLLRHKVTGISSNSSSSNSTYAVILDSGSTGTRIHVYRFNQSTQLQYIDDGFEYVYKVTPGLSSYASNPEGAAESVMALLEKAEAVVPEESQSSTPLRLGATAGLRSLDSNTSELILEAIWEVVKSNTSFALESDDSIAVLSGNQEGYYLWVTVNYLLNKLGEEYSNTIGVADLGGGSVQMAYAISEDVASNAPAYAPNGDAYVTKISLGGSTYHIYVHSYLNFGKESSRAAILNLTGDSDNPCVLTGFNGTYEYSDVEYKASAPANGSSYDECRNTVLKLFDFNATCAHKNCTFAGVWNGGGGAGQSKLYLATSFYYLAVEAGFADYNATISKVRLIDYKITAELACKTTYEEAKTVFPNMDEDVLAYTCMDLVYQYTLLVDAFGLDPWEVVTVVNEIEYEGSQLDASWALGSAIESVSSLSSYRRLMYVQ	846

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g1672	846	Gene3D	-	2	130	-	-
	Mibi06g1672	846	PANTHER	ADENOSINE/GUANOSINE DIPHOSPHATASE	222	360	IPR000407	GO:0016787
	Mibi06g1672	846	Gene3D	Exopolyphosphatase. Domain 2	131	209	-	-
	Mibi06g1672	846	ProSitePatterns	GDA1/CD39 family of nucleoside phosphatases signature.	555	570	IPR000407	GO:0016787
	Mibi06g1672	846	Gene3D	Exopolyphosphatase. Domain 2	556	814	-	-
	Mibi06g1672	846	CDD	NBD_sugar-kinase_HSP70_actin	437	662	-	-
	Mibi06g1672	846	CDD	NBD_sugar-kinase_HSP70_actin	10	170	-	-
	Mibi06g1672	846	Gene3D	-	435	830	-	-
	Mibi06g1672	846	FunFam	Apyrase 1	556	814	-	-
	Mibi06g1672	846	ProSitePatterns	GDA1/CD39 family of nucleoside phosphatases signature.	128	143	IPR000407	GO:0016787
	Mibi06g1672	846	Gene3D	Exopolyphosphatase. Domain 2	213	339	-	-
	Mibi06g1672	846	Pfam	GDA1/CD39 (nucleoside phosphatase) family	429	838	IPR000407	GO:0016787
	Mibi06g1672	846	Pfam	GDA1/CD39 (nucleoside phosphatase) family	6	226	IPR000407	GO:0016787

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g1672	Mibi-ChrMibi06	37233550	37247252	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g1672	427	835	Calmodulin-binding Proteins	AT3G04080	48.537	8.43e-128	390