Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1649 ATGATGAACCCATTTTCGTCATCCCCATCATCCAAGGCCAGAAAGAATAAGCAAACAGCCACAACAAGCAATACAAACACAACAATGGCAGCAACAACAACACAAGAGCAGAAACATGAAACAGCATGGGGAGGGAGGTACCTTGGTGTACGGAGGAGGCCATGGGGAAGATATGCAGCTGAGATCAGAGACCCTTCCACCAAAGAAAGGCATTGGCTTGGAACCTTCGATACTGCTGAAGAAGCCGCCTTGGCCTACGACAGAGCCGCCAGGTCCATGCGCGGATCACGTGCCAGAACCAACTTCGTTTACTCCGATACCCCTCCTGGTTCTTCCGTCACCTCCATTATCTCCCCAGACGAACAATCCCAACAGAACCACCATGATTTCTCCTCTTTCTTCGACCAAAATCCCCTCATTTCTCAACAATCAAACCCTAACCCCCAAATCTCCCAATGCAATCTCATAGCATTCACGAACAATAGTAGTAGTAGTAGTAGTAATAATAACAATGCTTGGTCTTCTGAACATTCGTCCGGGGCTTGTTATGGTTATCCGCAGCATCAATTTGGGACGGCGGAGGGGAATAATAGCATGACACACTTTCAGGAGTCGTATGATGATAGTAACACTGAGCTTCCTCCGTTGCCGCCTGATATTACGAGCTCCGTGGGTTACGAAATGGGGAACGGGTTTTACGGTAACGAATTCGGGTATTCAGAGCAGGGAAGTGTGATGGAAGCAAGTGGAGGATCGTACGGGGCTTATATGGGTTATGATTCGGTGGATTACGTGCATAGCCCTATGTTCAGCACAATGCCGCCGGTTTCGGATAAGGAGCCGGAAGGGTTTGATTTGGGGAATTCGTCTTATTTCTTCTGA 882 0.483 MMNPFSSSPSSKARKNKQTATTSNTNTTMAATTTQEQKHETAWGGRYLGVRRRPWGRYAAEIRDPSTKERHWLGTFDTAEEAALAYDRAARSMRGSRARTNFVYSDTPPGSSVTSIISPDEQSQQNHHDFSSFFDQNPLISQQSNPNPQISQCNLIAFTNNSSSSSSNNNNAWSSEHSSGACYGYPQHQFGTAEGNNSMTHFQESYDDSNTELPPLPPDITSSVGYEMGNGFYGNEFGYSEQGSVMEASGGSYGAYMGYDSVDYVHSPMFSTMPPVSDKEPEGFDLGNSSYFF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1649 293 CDD AP2 46 102 IPR001471 GO:0003700|GO:0006355
Mibi06g1649 293 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Mibi06g1649 293 MobiDBLite consensus disorder prediction 1 40 - -
Mibi06g1649 293 FunFam Ethylene-responsive transcription factor 2 46 104 - -
Mibi06g1649 293 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Mibi06g1649 293 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Mibi06g1649 293 Pfam AP2 domain 47 95 IPR001471 GO:0003700|GO:0006355
Mibi06g1649 293 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Mibi06g1649 293 SUPERFAMILY DNA-binding domain 46 104 IPR016177 GO:0003677
Mibi06g1649 293 MobiDBLite consensus disorder prediction 120 150 - -
Mibi06g1649 293 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 20 181 - -
Mibi06g1649 293 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Mibi06g1649 293 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1649 Mibi-ChrMibi06 36906476 36907357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1649 36 285 AP2-EREBP Transcription Factor Family AT5G13910 43.600 3.86e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g1649 AP2 1.9e-13 CL0081