Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1640 ATGTCAAGGAATCTTGCAGCAACAGTAGGAGGAGCTGCAGGAGCCGTGACATTGGTTGGGATAATTATACTACTCATATGGTTCTGCCTGTTTCACAAGAGTAGTGTTTCTAGAAATTCTGAGACAGGGTCCTCTGATCCTTCACAAGTGGGAAGACATGGTGGGATAGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTCTCAGGCTACAAAAAATTTCAGTGACAAAAATCTGATTGGAGAAGGTAAATTTGGGGAGGTTTACAGGGGTTTACTTCATGATGGAATGCTCGTAGCCATCAAAAAGCGCCATGGATTCCCTGCTCAGGAATTCGTAGATGAGGTACAATTCGTCTCATCCATTCAACACCGAAATCTTGTAAATCTTTTGGGGTACTGCCAGGAAAACAATCTACATTTTCTCATATATGAATACGTGCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTAGTCAACAATCACGTGAGAAGCTGGAATTCAAGCATAGGCTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTAGCTCATCTTCACTCCTTAAGCCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTTGTGGATGAAAACTTCATTCCTAAGGTTGCCGATGCAGGGCTTCGCAACTTCCTAGGAAGAGTCGAAATTGCAGGGTCATCTTCTCAAGTTGCAGCAGATGAAATCTTCCTTGCTCCTGAAAGATTTTCTGAAAAAAGTGATGTGTACAGTTTTGGGGTATTTTTGCTGGAACTGTTAAGCGGGAGGGAAGCAACTGTATCACCATCTTCGGACTCAAATCAAAATCTTATTGAATGGGTGAAAAGTAAGGTAGAGCATGGGATTATGTCAAACATAGTTGATGAGAAAATGGGAAGCAATTATACAGCTGAAGGCATGGAGGAGTTTATGTCACTGATAGTTGCATGCATTGATAGTTCAAGTGAGAGAAGACCAGCAATGAGCTATGTGGTGATGGAAATTGATCGAATACTTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAGGAACTCCAATTGTGACCCTTGGGAGCCAATTATTTAAAGCTGCCAAATAA 1125 0.4204 MSRNLAATVGGAAGAVTLVGIIILLIWFCLFHKSSVSRNSETGSSDPSQVGRHGGIELTVRDARRFEIEELSQATKNFSDKNLIGEGKFGEVYRGLLHDGMLVAIKKRHGFPAQEFVDEVQFVSSIQHRNLVNLLGYCQENNLHFLIYEYVPNGSVSSHLYGASQQSREKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIPKVADAGLRNFLGRVEIAGSSSQVAADEIFLAPERFSEKSDVYSFGVFLLELLSGREATVSPSSDSNQNLIEWVKSKVEHGIMSNIVDEKMGSNYTAEGMEEFMSLIVACIDSSSERRPAMSYVVMEIDRILEKERNLTTVMGEGTPIVTLGSQLFKAAK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1640 374 Gene3D Phosphorylase Kinase; domain 1 43 150 - -
Mibi06g1640 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Mibi06g1640 374 Gene3D Transferase(Phosphotransferase) domain 1 151 360 - -
Mibi06g1640 374 FunFam Protein kinase superfamily protein 43 150 - -
Mibi06g1640 374 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Mibi06g1640 374 FunFam Protein kinase superfamily protein 151 359 - -
Mibi06g1640 374 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 14 349 - -
Mibi06g1640 374 ProSiteProfiles Protein kinase domain profile. 78 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1640 374 SUPERFAMILY Protein kinase-like (PK-like) 64 340 IPR011009 -
Mibi06g1640 374 Pfam Protein tyrosine and serine/threonine kinase 82 341 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1640 Mibi-ChrMibi06 36797015 36799126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1640 15 342 Receptor kinase-like Gene Family AT5G56890 34.521 9.47e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Mibi06g1640 PK_Tyr_Ser-Thr 2.9e-39 CL0016