Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1635 ATGAATGCAAATGAGATACGGAACAAACTCTATTGGGAAAACAAGGTGGATCGAAGGCATGGAAAGAGGGCTTTCTCATATGAGGAAGCATCATCGGAGGAAGAAAAAAAGCAAGATTTGTTCGTTCCTTCTGGATTATTCCCATCGCTTTCCATATCTCAGTCTCAAGCACAAGACAACACTTCAGCCTCTCCCTTTCCTCCCTATCTTATCACCCCCACCACCTTCCCAATCCCACAAGTAACTAATTCTACTCCTTTGATTGAGACTCCGATCAGCTCATCCCACAATTTATCTCCAGGGAATAATGTAGAGAGGAAAAAGCATTATAGAGGAGTTAGGCAGAGACCATGGGGGAAATGGGCAGCCGAAATAAGAGACCCAAATAAAGCAGCAAGAGTGTGGCTTGGCACCTTTGACACGGCAGAAGATGCTGCTGCTGCTTATGATGCTGCCGCCTTGAAATTCAAAGGCAATAAAGCCAAGCTCAACTTCCCTGAACGTGTTGCCAACTTTTACACTCCTCCTCCTCCTCCTCCTCCTCGGAATCCGCCAGAGGCGGTGGCGGCACCGGAGACTCAACCACCGTGGCCACCTCCTCCGTCCGGTGAGGAGTTCCCAAACCTAATGCAGTATGCCCAGTTGCTTTGTAGTAGGGACGATGATGATCTAAAAAGAGCTGCTTCAGGTCTTTATAGTTATCACCACCAGAGTTTTAATAATAATGAGTCGTTTCTTTGTGATTCTACTACTTCATTATCATCAGCAATGGCTTCATCTTCTTCTACGGCTGGTGGATCTGATGAACAAATAATGGGAGATCGTGGTGGTGGCTATTCGGGTTCTTATTATTCTTTTTATAAGGGAGCTCATGATGATGATTTTGATGGAAGCCACACGAGGTGA 906 0.4592 MNANEIRNKLYWENKVDRRHGKRAFSYEEASSEEEKKQDLFVPSGLFPSLSISQSQAQDNTSASPFPPYLITPTTFPIPQVTNSTPLIETPISSSHNLSPGNNVERKKHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAAAAYDAAALKFKGNKAKLNFPERVANFYTPPPPPPPRNPPEAVAAPETQPPWPPPPSGEEFPNLMQYAQLLCSRDDDDLKRAASGLYSYHHQSFNNNESFLCDSTTSLSSAMASSSSTAGGSDEQIMGDRGGGYSGSYYSFYKGAHDDDFDGSHTR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1635 301 Gene3D AP2/ERF domain 108 168 IPR036955 GO:0003700|GO:0006355
Mibi06g1635 301 Pfam AP2 domain 109 158 IPR001471 GO:0003700|GO:0006355
Mibi06g1635 301 PANTHER DNA-BINDING DOMAIN 61 238 IPR044808 GO:0003700|GO:0009873
Mibi06g1635 301 MobiDBLite consensus disorder prediction 172 203 - -
Mibi06g1635 301 MobiDBLite consensus disorder prediction 256 275 - -
Mibi06g1635 301 SMART rav1_2 109 172 IPR001471 GO:0003700|GO:0006355
Mibi06g1635 301 ProSiteProfiles AP2/ERF domain profile. 109 166 IPR001471 GO:0003700|GO:0006355
Mibi06g1635 301 CDD AP2 108 167 IPR001471 GO:0003700|GO:0006355
Mibi06g1635 301 MobiDBLite consensus disorder prediction 87 101 - -
Mibi06g1635 301 FunFam Ethylene-responsive transcription factor 2 108 167 - -
Mibi06g1635 301 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Mibi06g1635 301 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Mibi06g1635 301 MobiDBLite consensus disorder prediction 87 111 - -
Mibi06g1635 301 SUPERFAMILY DNA-binding domain 109 167 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1635 Mibi-ChrMibi06 36756149 36758861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1635 86 232 AP2-EREBP Transcription Factor Family AT5G13330 49.359 1.21e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi06g1635 AP2 2.5e-15 CL0081