Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1633 ATGGGGGCGCAATCGTTGAATCGTGTTAGTCCGAATCAGAGTCCTACTGCTAACGGTGAGCTGGGTGCTGGGATGAGTCGTCGTCATTCAGTAGTTTTGACACCTAAGCGGAATATTGTACCGAATGGTCATAAATGTGACAAAACTGAAGAATCGAATGGTTCCAAAAATTCGCCAAATCAGAGAAGAAGCAGTCCTCGGATACAAGCCAAGCAAAATGTTAATACGGAACTTCCAGTGCGCCGCAAAGACGAGCTGCACGACAAATCTAGTGATGCGAAGATGAGTAACTGTAAAACAAGTGAAAACCACGAAAATGTGGATAAGCAACAAGTAGTTGGGGGACAAAAGAGAGCTAAAAATTTGGATAGTTCAACGACGAAGGAACCACAAGTGTCTAAGGAGTCTGTAATACAGAGAAGAACAAGTCCTCGAATCCAAGCCTTACAAAAGGTGGATAAGGCACTTCCAGTGTCCAGGAAGGGGCAGGTGTCCGGTGACCGAGACGATGCCAGTGATGTGAAGAAGAATACAACCCGCAAAAGAAATCGCGATGACGAAATTGTGTGTAAGGAAAGTGTTGTGGAGGACCAACAGAAAGCTAAAGAATTGAACGAATCAATTACTGAAAAGCCAAGTGAGGACAATGAATCGCCAGTTCAAAGGGTTGATAATTCTCGAGTTCAAAGTAAGGAATCTCTAGTGCGACGTAGAGTACAGTTATTAGAGGACCGAGATAACACTGAAAATGATAAGAAAAGCAAGTGTTTCAAAAGAAATTGCAATGATGAAAATGGGGATGGTCATGGGAGTAAGGAAGGGGGAGTAGGTAAGCCACCTAGAGCAAAGAAGCTGAAAGATGCTAGCTTGGTTCATAATAAGCAGGCATATGCGGGTTCGAAAGCGAATGGGGCGGGGAATTTGGCAGATAAAAGTGACTCTGTCAAAGTGAAAGAAACGTTGAGGTTGTTTAACAAGCATTATCTTCATTTTGTTCAGGAGGAGGAGAAGAGGTGTAATAAAGAGGAGTCTTCCCTCAAAGTGTCAGGAGGCTCAAAATCTAAGAAAAAGGCAAAAGCTGAAGGTGAAAAGCAGAAGGCTAAGCGACCTGATTTGAAAGCATTATCCAAGATGCTGGAAAATAAGGAGACATTGTATTCTGAGAAAAGAATTGGTGATATTCCAGGCATTAAGGTTGGACATCAATTCTATTCGCGTGCTGAAATGGTTACTGTTGGGTTCCACAGCCACTGGCTAAATGGCATAGATTTTATGGGCCAAGCTTATTCCAAAGTGCCACAGTACTGTCACTATGAATTTCCAATTGCTGTGGCCATTGTTTTGTCGGGGATGTATGAGGATGATCTTGATAATGCTGAGGACGTTGTATATACTGGTCAAGGTGGGCATAATTTGATAGGTGATAAGCGCCAAAATGGGGATCAGAAGTTAGAGCGGGGCAATCTGGCTCTGAAGAACTGCATGGATCACTGTGTGTCTGTCAGGGTGATTCGCGGACATGAATCCTCAAACAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTACAAGGTTGTTAACTATTGGGCAGAAAAAGGATTAGCTGGGTTTACAGTCTACAAGTTTCGGCTGAAGAGGCTTGATGGGCAGCCAATCTTGACAACTAACCAGGTGTATTTCATTAATGGACGAGCTCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAGGACATCTCCAAAGGTGAGGAAGAAGTGCCCATTGCTGCCACTAACCTGATTGATGACCCTCCAGTTGCACCCACTGGTTTTAAATATAAAAAATCAATTTTGCTTTCAAAGAACGTAAAGCTCCCCTCGGCTGTCACTGGATGCAATTGCAAAGGCTTATGTGTGGATCCTACATCCTGTGAATGTGCTTTACGAAATGGATCTGATTTTCCTTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATGTTGTCTTCGAATGTGGGCCAAATTGTGGATGCGGTCCTGGTTGTGTTAATCGAACTTCTCAAAGAGGACCAAGATATCGTCTTGAGGTTTTTCGTACTGCGAAGAAAGGATGGGCTGTTAGATCTTGGGATTTCATACCTTCTGGAGCACCAGTTTGTGAATACACAGGATTAGTCAGGAGGACAGAAGATGTAGAGAATACACTGGAGAACAACTACATTTTTGAGATAGATTGTTTGCAAACAATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAATGAAACATCTCAAGCAGTCAAGCTCTTAGACAATTATGCAGATGATAATTCTGAATCTGTACCAGAGTTTTGTATTGATGCTGGATCAACTGGAAATATAGCTCGATTCATAAACCATAGTTGTGAACCAAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCCTTACAGGAACTTACATATGACTATGGTTATGCCCTTGATAGTGTATTGGGTCCTGATGGGAAAGTAAAGAAAATGGCATGTTACTGTGGAGCTGCTGACTGCAGGAAGCGACTATTCTAA 2613 0.4271 MGAQSLNRVSPNQSPTANGELGAGMSRRHSVVLTPKRNIVPNGHKCDKTEESNGSKNSPNQRRSSPRIQAKQNVNTELPVRRKDELHDKSSDAKMSNCKTSENHENVDKQQVVGGQKRAKNLDSSTTKEPQVSKESVIQRRTSPRIQALQKVDKALPVSRKGQVSGDRDDASDVKKNTTRKRNRDDEIVCKESVVEDQQKAKELNESITEKPSEDNESPVQRVDNSRVQSKESLVRRRVQLLEDRDNTENDKKSKCFKRNCNDENGDGHGSKEGGVGKPPRAKKLKDASLVHNKQAYAGSKANGAGNLADKSDSVKVKETLRLFNKHYLHFVQEEEKRCNKEESSLKVSGGSKSKKKAKAEGEKQKAKRPDLKALSKMLENKETLYSEKRIGDIPGIKVGHQFYSRAEMVTVGFHSHWLNGIDFMGQAYSKVPQYCHYEFPIAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLIGDKRQNGDQKLERGNLALKNCMDHCVSVRVIRGHESSNSYSGKVYTYDGLYKVVNYWAEKGLAGFTVYKFRLKRLDGQPILTTNQVYFINGRAPQSIAEIRGLVCEDISKGEEEVPIAATNLIDDPPVAPTGFKYKKSILLSKNVKLPSAVTGCNCKGLCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPNCGCGPGCVNRTSQRGPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGLVRRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSQAVKLLDNYADDNSESVPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMACYCGAADCRKRLF 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1633 870 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 40 863 - -
Mibi06g1633 870 ProSiteProfiles Pre-SET domain profile. 625 687 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi06g1633 870 ProSiteProfiles Post-SET domain profile. 854 870 IPR003616 -
Mibi06g1633 870 Pfam Pre-SET motif 581 682 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi06g1633 870 Coils Coil 231 251 - -
Mibi06g1633 870 MobiDBLite consensus disorder prediction 229 285 - -
Mibi06g1633 870 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 76 870 IPR025794 GO:0016571
Mibi06g1633 870 ProSiteProfiles YDG domain profile. 392 547 IPR003105 -
Mibi06g1633 870 MobiDBLite consensus disorder prediction 1 20 - -
Mibi06g1633 870 Gene3D - 374 563 IPR036987 -
Mibi06g1633 870 MobiDBLite consensus disorder prediction 1 285 - -
Mibi06g1633 870 SMART G9a_1 387 551 IPR003105 -
Mibi06g1633 870 Pfam SAD/SRA domain 391 551 IPR003105 -
Mibi06g1633 870 ProSiteProfiles SET domain profile. 690 840 IPR001214 GO:0005515
Mibi06g1633 870 MobiDBLite consensus disorder prediction 163 221 - -
Mibi06g1633 870 SUPERFAMILY SET domain 575 847 IPR046341 -
Mibi06g1633 870 MobiDBLite consensus disorder prediction 340 370 - -
Mibi06g1633 870 MobiDBLite consensus disorder prediction 77 106 - -
Mibi06g1633 870 SMART preset_2 578 674 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mibi06g1633 870 SMART set_7 690 846 IPR001214 GO:0005515
Mibi06g1633 870 Gene3D SET domain 571 870 IPR046341 -
Mibi06g1633 870 MobiDBLite consensus disorder prediction 117 146 - -
Mibi06g1633 870 SUPERFAMILY PUA domain-like 374 560 IPR015947 -
Mibi06g1633 870 Pfam SET domain 701 840 IPR001214 GO:0005515
Mibi06g1633 870 MobiDBLite consensus disorder prediction 53 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1633 Mibi-ChrMibi06 36714564 36725346 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1633 378 870 EF-hand Containing Proteins AT5G13960 65.992 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mibi06g1633 SAD_SRA 4.2e-48 CL0178