Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1630 ATGCACCACTCTGCAGGATCAGCTGCCTTTCTATTCAGGAGGAGTGGGATTGGCGAGAGGTTGGTGTCTGCGGCTAAGGATGGCGATTTGGTTGAGGCCAAGATGCTTTTGGACTTTAACCCTTGTCTTGTTAAGTATTTTACTAATTCTCCTTTCCATTTTGCTGCTGCCAAGGGCCATAACGAGCCTTGGTTGTTCACACCGACGAACTTCCCCTTCCCCTCCAAAATTTTCATGTCCATCTTGCCCTCACAAGCTCAGGCATCAACCTCGTCGTCATCTCAATCTCCGATATCTCCAAACCCTAATTCCCAACATGGAAACCTCTCTCATTCTCCTCCCCTTCAAGTTCCATCCTTCGGATCTCTCCGGATTTCCGATTCACCATCTCCCGCCGCTATGTCCGACGTCAATTCAGGTCCATCGACTCCGGCTACAGAAGATTCTGGTGGACCTTCCGAAAAGGTGACTGAGTTGGGATATTCAAGTGGTATGAAGAGTAGTCCTCACCAAAACTCCAGAGTGCATTCCCAAAGTCAGTCAAGAAGATGGGCTGCTAGATCATCGCAGTCAGCAGGGAAGATGACGGGAACAAGTACTTCTCCTGGAGATCAGCAAAATACTAGGTCCATTAATCCTCATGGGAACACCCCTTCAGCAGGAAGAAAATCTCAGATGGTTAATGGTAATCACTTGCTGAACTTTCATTATGATCCCATATCTCGTCCTCAAGCAAGGGGTCCTCCTCCACCACCAAGAAGGCAGCATAAGAGAAAGCCATACAACAAAGATTTATTTTTACAGGCCAATTACAAATTCGTGGTGTTAGATTCAGGAGATTATTCACCAGAGTCTTTGGACCCAGATAAAATGCTACAGTGGGAAGATATTGTATGCGTGAGGTACTCCACTCCATTCTTGGTTCAGTGTCCAATTTGTTTGGAGTATCCGCTTTGTCCACAAATAACCTCTTGTGGACATATTTTTTGTTTCCCCTGTATCTTACAATATTTGATGATGGGTGAAGAGGATCACAAAGGTGATTGCTGGAAAAGGTGTCCCTTATGTTTTGTCATGATATCTGCAAAGGATTTATATACCATCTTCATTGAAAATGTTGAGCAGTATCAAGTTGGAGATATCATCGAGTTCAGACTTTTAACCCGGAAAAAGGACTCTTTTACTCTGTATGATAAAAATAATGCGACAGATGTCTTATCAGACCCATTTTCCAAGTTTACACTCACATCAGATGTAGATCTCTCAGTGAGACAGGCGATCTCAGATCTAGACGGTTGGCTAGCTAAAGCTGATTCTGGTCTTGTGGATGATTTGGAGAAACTTCCATATGTTTGTGCTGCGATGGAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACAGGGCTTGTGATGTTGGAAAGCCTCATAGGCTTATTGATTGTGGACATCACAAACTATCAACAGTTCTAAATGGCACTGATGTTGATGATGAAGCCCAGTCTTCTGGATCGGGATCTTCCTCTACAGATTTCCACGACCCAAGCAAGGGTATAATGATGGATAACTCAAATGCAAGAGTCTTTCCAGATCAAACATTGGGTGTGGAGAGAAAAGTATTAGATCAAGAAATTAATCTATCTTCTTCCTATGATGAGAAAAATGATATTCAAAGGCATACAAATGGTTTTGGAGATTCAAAGGAGAATGACTCATACAATTTTTACCAGGCTGCTGATGGTCAGCATCTCATTCTGCATCCCCTGAACATGAAGTGTCTACTTCACCATTATGGAAGCTATGATATGCTTCCACACAGAATACGTGGAAGGATTCTGCAATTGGAGATGGTCACTCAGTCAGAGGCAATGAGGAGGCGGTACAGATTTTTGAGTCATTTTCCTTTAACAACAACATTTCAGCTTTGTGAAATTGATTTGTGTGAGATGCTGCCCTCTGAATCCCTGGCCCCATTCATGGACGAATTGAAGAAGCGTGCAAACCAGAGGAGGCAACTTGCTAAGAAGGAACGGAAAGAGAAAATCAGGGCTGAAGCTACTTCTACTCATTCTATTCCCATACCAACCAGTTCTCAGCTGATGTCTCATGACAATTCTCCACCATTCTCCATGGATGACTTTGAAGCTTTGGGGAATTCAGCTGTATCATCAAGTCCTCCTGTTGTTGGGGGGAGAAGTTTGTTTTCAAATGTCACAAGACTTGGTTTTGCTGCTGGTCATGATTCTCCGTCCTTGAACATTCAAGAAACTGTTGGTAATCATAATACCACAACTGGTTCTTCTGGCTCGACAGGCCTGAGAAATGTGGAGACGTCATCATTTGCCAATGTTATATCTAGAGCAGAGTCTATTAATAGCTTAAATGCACCCAAGACAAGCGACTTGGGTAAGAAGGGGAAGAAACCAACTAGAGTTCTTCTGTCAACAGCCGGGGGCAGGCGTTACTGA 2469 0.4346 MHHSAGSAAFLFRRSGIGERLVSAAKDGDLVEAKMLLDFNPCLVKYFTNSPFHFAAAKGHNEPWLFTPTNFPFPSKIFMSILPSQAQASTSSSSQSPISPNPNSQHGNLSHSPPLQVPSFGSLRISDSPSPAAMSDVNSGPSTPATEDSGGPSEKVTELGYSSGMKSSPHQNSRVHSQSQSRRWAARSSQSAGKMTGTSTSPGDQQNTRSINPHGNTPSAGRKSQMVNGNHLLNFHYDPISRPQARGPPPPPRRQHKRKPYNKDLFLQANYKFVVLDSGDYSPESLDPDKMLQWEDIVCVRYSTPFLVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDCWKRCPLCFVMISAKDLYTIFIENVEQYQVGDIIEFRLLTRKKDSFTLYDKNNATDVLSDPFSKFTLTSDVDLSVRQAISDLDGWLAKADSGLVDDLEKLPYVCAAMEQLEQRKKYWNEHRACDVGKPHRLIDCGHHKLSTVLNGTDVDDEAQSSGSGSSSTDFHDPSKGIMMDNSNARVFPDQTLGVERKVLDQEINLSSSYDEKNDIQRHTNGFGDSKENDSYNFYQAADGQHLILHPLNMKCLLHHYGSYDMLPHRIRGRILQLEMVTQSEAMRRRYRFLSHFPLTTTFQLCEIDLCEMLPSESLAPFMDELKKRANQRRQLAKKERKEKIRAEATSTHSIPIPTSSQLMSHDNSPPFSMDDFEALGNSAVSSSPPVVGGRSLFSNVTRLGFAAGHDSPSLNIQETVGNHNTTTGSSGSTGLRNVETSSFANVISRAESINSLNAPKTSDLGKKGKKPTRVLLSTAGGRRY 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1630 822 Coils Coil 660 684 - -
Mibi06g1630 822 MobiDBLite consensus disorder prediction 495 514 - -
Mibi06g1630 822 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 302 386 IPR013083 -
Mibi06g1630 822 ProSitePatterns Zinc finger RING-type signature. 325 334 IPR017907 -
Mibi06g1630 822 MobiDBLite consensus disorder prediction 495 517 - -
Mibi06g1630 822 CDD RING-HC_RNF10 310 357 - -
Mibi06g1630 822 ProSiteProfiles Zinc finger RING-type profile. 310 356 IPR001841 -
Mibi06g1630 822 Pfam Zinc finger, C3HC4 type (RING finger) 310 356 IPR018957 GO:0046872
Mibi06g1630 822 SUPERFAMILY RING/U-box 309 362 - -
Mibi06g1630 822 PANTHER RING FINGER 10 FAMILY MEMBER 140 822 IPR039739 -
Mibi06g1630 822 MobiDBLite consensus disorder prediction 160 231 - -
Mibi06g1630 822 FunFam RING finger protein 10 303 371 - -
Mibi06g1630 822 SMART ring_2 310 356 IPR001841 -
Mibi06g1630 822 MobiDBLite consensus disorder prediction 84 150 - -
Mibi06g1630 822 MobiDBLite consensus disorder prediction 84 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1630 Mibi-ChrMibi06 36687252 36698251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1630 141 757 C3H Transcription Factor Family AT3G26730 53.715 0.0 637