Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1622 ATGGAAAGGCACATGCTACCCAGAGCTCATGGCGTCCCTTGGATGGAAGATGTTGAAGATTCAGCATCTTGGACCAGAACTAACAACGAAGGTGAGTCTAAGGACCAGGACATTGCTTTGGGAGGTTCATTAACTTCCTTCAAATCCATGCTTGAAGGTGAATGGTACATGGATTCTGCTATCAACCCATCTCATCAACAACATCAAGATCTCTCTGGTCTCACGGTTCACCAAGAAACCTGCAGAGATGTTGGTTTTTGTCCAAACCAAAACGATAATTTTCTGTTACAGCCTATCGATTCATCTTCTTGTTCACCCTCATTCACCATCGACCCCGCGCATTCACAGCCATTTTTACAGCCCAAATCTTGCTTCCCTTCTCTCTTTAACCCCATTTGCAACAACCCTTTTGAGAATAACGGCTTCGATTTGGGCCCTGAAAGTGGATTTCTCAGTCAATTCCAGGGAAATCAGACTCCGAATTCCCATGTTCTTATGGGATTTTCTGGCTTGAATGCTCAACCACATATGGGAAACCTCGACCTTTTGCCTGCTTCTGACAATGGAGTCACATTCGGTGGTGGATTTAGTCCAATGGGTTTAGAATCCTATGATGGTACAGGGAATGCTCTGTTTTCAAATAAGGCTAAGGTTTTAAGACCACTTGATGTTTTCCCTCAAGTTGGTACTCAACCTACCCTATTTCAGAAGCGAGCTGCGCTTCGGCAAATCTCAGGGGGAGCTGATAAATTGGGATCTTTAGATATTTCTCCGTCTGGGTTTAGTGATTATTCAAGCATGGAGAAGAAGAGGAAGTTAGAAGACGGTGACACTGAAGAAGCTAGTATCGATGCTTCTGGACTGAATTATGATTCTGATGATCTTAATGAGAATAATAAGGCGGATGAGAATGGGAATAACGGTGGAAGCAATTCTAATGCAAACAGTACTGTTACAGGTGGAGATCAGAAGGGGAAGAAGAAGGGATTGCCTGCGAAAAATCTCATGGCTGAGAGAAGACGCAGGAAAAAATTAAATGATAGGCTGTATATGCTTCGGTCTGTTGTTCCAAAGATTAGTAAGATGGATCGGGCTTCCATACTTGGGGATGCAATTGACTACTTGAAGGAGCTGCTTCAGCGGATCAACGATCTTCATAATGAGCTGGAGTCAACCCCACCTGGTTCACTGCCACCACCTTCTACAAATGTCCACCCTTTGACGCCTACTCTCCCAACACTTCCCTGCAGGGTCAAGGAAGAACTTTGCCCTACCTCTTTGCCGAGCCCGAAGAACCAGCCTTCAAGAGTGGAAGTTAGGTTGAGGGAAGGGAGAGCTGTGAACATCCATATGTTTTGTGCCCGCAGGCCAGGTCTTCTTCTTACCACCTTGAAGACTTTGGACAACCTTGGATTGGACATTCAGCAGGCTGTTATCAGTTGTTTCAATGGCTTTGCTTTAGATGTGTTCCGAGCTGAGCAATGCAGAGAAGGCCAGGATGTTCCCCCCGAGCAAATTAGAGCAGCATTGTTGGATTCAGCGGGTTGCCATGGAATGGTGTGA 1563 0.4549 MERHMLPRAHGVPWMEDVEDSASWTRTNNEGESKDQDIALGGSLTSFKSMLEGEWYMDSAINPSHQQHQDLSGLTVHQETCRDVGFCPNQNDNFLLQPIDSSSCSPSFTIDPAHSQPFLQPKSCFPSLFNPICNNPFENNGFDLGPESGFLSQFQGNQTPNSHVLMGFSGLNAQPHMGNLDLLPASDNGVTFGGGFSPMGLESYDGTGNALFSNKAKVLRPLDVFPQVGTQPTLFQKRAALRQISGGADKLGSLDISPSGFSDYSSMEKKRKLEDGDTEEASIDASGLNYDSDDLNENNKADENGNNGGSNSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPPSTNVHPLTPTLPTLPCRVKEELCPTSLPSPKNQPSRVEVRLREGRAVNIHMFCARRPGLLLTTLKTLDNLGLDIQQAVISCFNGFALDVFRAEQCREGQDVPPEQIRAALLDSAGCHGMV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1622 520 Coils Coil 372 392 - -
Mibi06g1622 520 MobiDBLite consensus disorder prediction 265 279 - -
Mibi06g1622 520 MobiDBLite consensus disorder prediction 263 335 - -
Mibi06g1622 520 CDD bHLH_AtAMS_like 332 399 - -
Mibi06g1622 520 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 194 516 - -
Mibi06g1622 520 Gene3D - 323 392 IPR036638 GO:0046983
Mibi06g1622 520 Pfam Helix-loop-helix DNA-binding domain 336 378 IPR011598 GO:0046983
Mibi06g1622 520 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 332 399 IPR036638 GO:0046983
Mibi06g1622 520 SMART finulus 335 384 IPR011598 GO:0046983
Mibi06g1622 520 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 329 378 IPR011598 GO:0046983
Mibi06g1622 520 MobiDBLite consensus disorder prediction 19 38 - -
Mibi06g1622 520 MobiDBLite consensus disorder prediction 301 322 - -
Mibi06g1622 520 FunFam BHLH transcription factor 325 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1622 Mibi-ChrMibi06 36604022 36607221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1622 23 493 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 55.172 7.72e-146 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi06g1622 HLH 1.6e-09 No_clan