Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1615 ATGGATGAGGAGGCAGTAGTAGATAAGGTGCTCCGCAAAAACGAGGCCTCTCCCTTGGTGGCAGGTGTTCACACTCCTCTTCCCCTTGTCACCGTCCAACCAGACACTACCACTTTCGCCACCTTTGATTCCGGGTCGGGTCACCCTCCGACCCGAGTAGACCACCTCGGCCTCATCTCTTTTGCCAACGTTCATCGGAAGAAAAGGATGGCCCGACAGAGAAGGTCCTCCGCAATCAATCCTCCTCCTCCTTCTTCCTCAACGCACGTGCCTGTTATCTCCCCAGTCCAATCTTTCAATAATCCTCTCCCGCCCCCACGTGAAATTGATCAACAAAGGTTAAGATTTCTTTTCCAAAAGGAGCTCAAGAATAGTGATGTAAGCTCCCTTCGAAGAATGGTGCTCCCGAAGAAAGCGGCTGAGGCTTTCCTTCCTATCCTTGAGTCTAAAGAAGGAATTGTTATAAGCATGGATGATATGGATGGTATTCATGTCTGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAACAGTCGGATGTATGTACTTGAAAATACAGGGGAATTTGTTAGCACACATGGCTTACGTCTTGGAGATTCCATTGTGGTTTATCAGGATAATCAAACCCTTAATTATGTGATTCAGGCTAAAAAGGCTTCTGAGCAAGAAGATTTCATGGCTATATCCAGTGATAACATTAATGATCTCTTTCTACAAGACTATGAGGTTAACAAGTCAAATAGTTTGAGTGTTATGACATATCCCACCATGAATGACACAGAAATGTCATTCATCTATGAAACTACATTCTCAAATGATTCTCCATTTGACTTTTTGGGTGGATCAATGACCAGTTTCTCAAGGATCGGATCCGTCGAGACCTTTGGCTCTGTGGAAAATTTGTCACTAGATGACTTCTATTGA 924 0.4437 MDEEAVVDKVLRKNEASPLVAGVHTPLPLVTVQPDTTTFATFDSGSGHPPTRVDHLGLISFANVHRKKRMARQRRSSAINPPPPSSSTHVPVISPVQSFNNPLPPPREIDQQRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDMDGIHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSIVVYQDNQTLNYVIQAKKASEQEDFMAISSDNINDLFLQDYEVNKSNSLSVMTYPTMNDTEMSFIYETTFSNDSPFDFLGGSMTSFSRIGSVETFGSVENLSLDDFY 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1615 307 CDD B3_DNA 116 218 IPR003340 GO:0003677
Mibi06g1615 307 FunFam B3 domain-containing transcription factor FUS3 114 229 - -
Mibi06g1615 307 SMART B3_2 118 220 IPR003340 GO:0003677
Mibi06g1615 307 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 65 226 IPR044800 GO:0003700
Mibi06g1615 307 MobiDBLite consensus disorder prediction 70 105 - -
Mibi06g1615 307 SUPERFAMILY DNA-binding pseudobarrel domain 116 214 IPR015300 -
Mibi06g1615 307 Coils Coil 303 307 - -
Mibi06g1615 307 Pfam B3 DNA binding domain 118 216 IPR003340 GO:0003677
Mibi06g1615 307 Gene3D - 114 233 IPR015300 -
Mibi06g1615 307 ProSiteProfiles B3 DNA-binding domain profile. 118 220 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1615 Mibi-ChrMibi06 36537338 36540425 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1615 42 307 B3 DNA Binding Superfamily AT3G26790 51.792 3.89e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi06g1615 B3 1e-15 CL0405