Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1603 ATGATGTCTTCAGAACGTCCCATGTACGATTTCATGAGCCCTCCCTCCGCCGTCCCCCACCGCCTATTCCGATGCCACTACTGTCACCGGAAGTTCTTCTCCTCCCAAGCCCTCGGCGGCCACCAGAATGCCCACAAGCAGGAACGCGCCGCCCTCCGCCGTACAACCACCACCACCACCACCACCACCACCAACCACCATCATCATTATAACTCTGTGCCCATGTTCATCCCCACAACAAGTCATATTATTCTGCCTCCCAGTCATTTATTCCTCCATGAATATGATCACCACCACAGCCTTATGAATATTAATAACAATCCCTATGAATTTTTCTGCACTAACCCTAACCCTAGGGCGACCGATTCTGCTGCTGATGAGCTTGACCATGTCAACCTTGACCTCACTCTCCACCTGTGA 420 0.519 MMSSERPMYDFMSPPSAVPHRLFRCHYCHRKFFSSQALGGHQNAHKQERAALRRTTTTTTTTTTNHHHHYNSVPMFIPTTSHIILPPSHLFLHEYDHHHSLMNINNNPYEFFCTNPNPRATDSAADELDHVNLDLTLHL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1603 139 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Mibi06g1603 139 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 19 77 IPR044246 GO:0009788
Mibi06g1603 139 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Mibi06g1603 139 Gene3D Classic Zinc Finger 10 73 - -
Mibi06g1603 139 SUPERFAMILY beta-beta-alpha zinc fingers 20 50 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1603 Mibi-ChrMibi06 36401022 36401441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1603 20 54 C2H2 Transcription Factor Family AT5G14010 80.000 4.74e-15 66.2