Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1600 ATGGAGACTCTCCCTAGCTTTGTTGTCAATGGCGGCGCTAAGCTTCCCACTGGCTTCAGGTTCTGTCCCACCGACGAAGAGCTCATTGTTCATTATCTTAAGAAGATGGTCCTTGGTATGCCATTACCTGCCTCTGTGATTCCTGTTCTCGATGTGTTCCAGACTGATCCATGGAACCTTCCAGGTGTGGGTGAAGCAGATACCATGGGAAAGGGGTATTTTTTCAGCGAAAGAAAGGATCTTTACTATGATGGCTTAATCATGATCGCTGATGGCACTGGTTTCTGGAAACCCATTGAAAATGAGATTCCAATTGTTTATGCTCGGATCAACAGGGTGATTGGTACCCGCAAAACCCTCGTTTTTTGCGGCGGTGACTATTCCGGCGATGGCAATGAACACGCTGAAACTCAATGGTTTATGCATGAAATTCGCCTCATCCCACCTGTCGCCAACGGGACGACTCCTTTCCCAGCAGAGCTGCTTCATCGTTGGACAAAGCTGGCTGTGTATCGTGTTTTCAAGGAGAATGGTGATGATGATAAGAAGAAGCCTAAGAGAAAGAGGACTAAGAAGCAATCCAAGAAGAAGAAGGCTGAGAAGCCTAAGGGAGAAATGCCAACCTTCATTGATTTCGCCACTGATGGCAATGACTCCGACGAGGCGGCGCCGCCACCTCCGCCGCCGTCTCCGAGTGTCAGTGAAGGAAGTGATGTCACCTCTTACTAA 729 0.487 METLPSFVVNGGAKLPTGFRFCPTDEELIVHYLKKMVLGMPLPASVIPVLDVFQTDPWNLPGVGEADTMGKGYFFSERKDLYYDGLIMIADGTGFWKPIENEIPIVYARINRVIGTRKTLVFCGGDYSGDGNEHAETQWFMHEIRLIPPVANGTTPFPAELLHRWTKLAVYRVFKENGDDDKKKPKRKRTKKQSKKKKAEKPKGEMPTFIDFATDGNDSDEAAPPPPPPSPSVSEGSDVTSY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1600 242 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Mibi06g1600 242 SUPERFAMILY NAC domain 11 176 IPR036093 GO:0003677|GO:0006355
Mibi06g1600 242 MobiDBLite consensus disorder prediction 178 242 - -
Mibi06g1600 242 Pfam No apical meristem (NAM) protein 16 146 IPR003441 GO:0003677|GO:0006355
Mibi06g1600 242 PANTHER NAC TRANSCRIPTION FACTOR 56 15 194 - -
Mibi06g1600 242 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1600 Mibi-ChrMibi06 36364974 36365956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1600 7 146 NAC Transcription Factor Family AT5G13180 46.809 4.87e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi06g1600 NAM 4.3e-25 No_clan