Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1589 ATGGCTCCCAAAAGAGGTGTGAAAGCTCCTGTCGCCGCTGCTAAGAAGAAGCAGCAGGTCGTCAATCCACTTTTCGAGAAGCGTCCGAAGCAATTCGGGATCGGAGGTGCATTGCCACCTAAGAGAGACCTTACTCGATTTGTGAAATGGCCCAAAACTGTTCAAATCCAGAGGAAGAAGAGGATCCTCAAGCAAAGGTTGAAGGTTCCCCCAGCATTGAACCAGTTCACCAAAACATTGGACAAGAATCTCGCAACTAGCCTGTTCAAGATGCTCCTCAAGTACAGGCCTGAGGATAAAGCTGAAAAGAAAGAGCGACTGTTGAAGAGGGCTCAGGCAGAAGCAGAAGGAAAATCTGCCGAAGCTAAGAAACCTATTGTTGTAAAATATGGTCTCAATCACGTCACATACCTTATTGAGCAGAACAAGGCACAGCTGGTTGTGATTGCACATGATGTAGACCCAATTGAACTGGTTGTTTGGCTGCCAGCATTGTGCAGGAAGATGGAAATTCCCTACTGCATTGTTAAGGGCAAGGCACGCTTGGGAACGATCGTCCACAAGAAAACTGCATCAGTTTTGTGCTTGACCACAGTCAAGAACGAAGATAAACTTGAATTCTCTAAGATTCTAGAGGCGATCAAGGCCAACTTCAATGACAAGTATGACGAATACAGGAAGAAGTGGGGTGGTGGGATTATGGGTTCTAAATCCCAAGCCAGAACCAAGGCCAAGGAAAGGCTCCTTGCCAAGGAAGCGGCACAGAGAATGACATAA 777 0.4672 MAPKRGVKAPVAAAKKKQQVVNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKMLLKYRPEDKAEKKERLLKRAQAEAEGKSAEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGTIVHKKTASVLCLTTVKNEDKLEFSKILEAIKANFNDKYDEYRKKWGGGIMGSKSQARTKAKERLLAKEAAQRMT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1589 258 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 115 205 IPR004038 -
Mibi06g1589 258 SUPERFAMILY L30e-like 88 229 IPR029064 -
Mibi06g1589 258 FunFam 60S ribosomal protein L7a 50 233 - -
Mibi06g1589 258 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 42 234 - -
Mibi06g1589 258 ProSitePatterns Ribosomal protein L7Ae signature. 166 183 IPR004037 GO:0042254|GO:1990904
Mibi06g1589 258 PRINTS Ribosomal protein L7A/RS6 family signature 173 187 IPR018492 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A/RS6 family signature 147 160 IPR018492 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A/RS6 family signature 163 173 IPR018492 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A/RS6 family signature 128 142 IPR018492 -
Mibi06g1589 258 Gene3D - 50 233 IPR029064 -
Mibi06g1589 258 Coils Coil 101 121 - -
Mibi06g1589 258 PRINTS Ribosomal protein L7A family signature 46 63 IPR001921 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A family signature 90 103 IPR001921 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A family signature 185 209 IPR001921 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A family signature 217 237 IPR001921 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A family signature 29 46 IPR001921 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A family signature 124 144 IPR001921 -
Mibi06g1589 258 PRINTS Ribosomal protein L7A family signature 66 85 IPR001921 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1589 Mibi-ChrMibi06 36227519 36229627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1589 1 258 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 85.659 8.31e-168 462