Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1582 ATGGAGAATTATGCCATGTTGTTCCCTGGTCCAACCTCTTCTTCTTCATCAAGCTATCAAATGCCAACGAGTGCCATGGGAGGAGGCTCTTATAACTATCATGGGTTTAGTAACATGGAGGGCCAAATCCCTAATAGGTTTCTTGGTTTGAGGCCTGGTGATCAAACTAGTGATGTGGAGAAAAGAGGAGAAGTTTCTGAGAGAGGAAATGATGTGAAGGATGATGGTGGAGGTACGGGGAAAAAGAAAGGAGAGAAGAAGGTGAGAAAGCCAAGATTTGCTTTCCAAACTCGAAGCCAGGTTGACATTCTTGATGATGGCTACAGGTGGAGAAAATATGGCCAGAAAGCTGTTAAAAACAACAAATTCCCCAGGAGCTACTACAGATGTACACATCAAGGGTGCAATGTGAAAAAGCAAGTGCAGCGTCTAACGAAAGACGAAGGGGTAGTTGTGACCACTTATGAAGGAGTTCACACTCATCCCATTGAGAAGACAACCGACAACTTCGAGCACATTCTCAGTCAGATGCATATATACACTCCCTTTTAA 552 0.4384 MENYAMLFPGPTSSSSSSYQMPTSAMGGGSYNYHGFSNMEGQIPNRFLGLRPGDQTSDVEKRGEVSERGNDVKDDGGGTGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMHIYTPF 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1582 183 SMART WRKY_cls 104 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1582 183 MobiDBLite consensus disorder prediction 44 90 - -
Mibi06g1582 183 MobiDBLite consensus disorder prediction 8 22 - -
Mibi06g1582 183 MobiDBLite consensus disorder prediction 55 82 - -
Mibi06g1582 183 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 26 166 IPR044810 GO:0003700
Mibi06g1582 183 Pfam WRKY DNA -binding domain 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1582 183 ProSiteProfiles WRKY domain profile. 99 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1582 183 Gene3D WRKY domain 89 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g1582 183 MobiDBLite consensus disorder prediction 1 22 - -
Mibi06g1582 183 SUPERFAMILY WRKY DNA-binding domain 96 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g1582 183 FunFam WRKY transcription factor 57 90 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1582 Mibi-ChrMibi06 36157560 36160194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1582 67 183 WRKY Transcription Factor Family AT5G13080 72.650 4.88e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi06g1582 WRKY 1.7e-26 CL0274