Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1581 ATGGAGTGGTGCCCAAAAGAGTCAGTATGGGATCAGTCAAACGTTGAAAAAGCCCCAGTGGAGAAATCAGTATCAATTGGGGACACAGAGACGTCGAATTCAAAATCATCCTCATCATCATCATCATCAAAGAGGAAGCGCTTGTGCCACAAGTCACCGGAGAAGGTGAATTGCTCGGTAGATGGATGCACCTTTGATCTGGGGACTTGCCGGGAATATCACCGGCGGCATAGGGTGTGTCAGCCTCACTCCAAGACCTCTTGTGTGCTTGTGAAGGGACAGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCGCTGGATGAGTTTGATGGCTTCAAGCGAAGCTGTAGGAGACGTTTAGAGGCCCATAATAAACGCAGAAGGAAACCTCGTCCTCCACCCCTACCCTTCTCTGCAGATTACAAAGGACCCAGAATTTTGCAATTTGGAAATCATACTAGTGATGATCGTTACATGAGTATGTGGGGTGCTCAATCTTCTGGTAGCTACAATTGTTACCCACCAATTCTGCCAAAGATTGAGATTGATCAACAGAGTGTGAAAGGTCGTGGATTTTCCAACATAGAGAATATGCAGGTGAATTGGTATAATAATAATGATGATGATGATAATAATAATAATAATAATGGACCAGTCCTGCCATTGGCAGCAGAAGCTGGAATCGGAGGCAAGAACCAGAGGATGCCTTTGGATTCTGCTCTCTATCTTCTGTCAGCATTTCAGGCACAGAGTTCCTCAGAGTTTAGTATGGTGGAGTCTAGTATAGACTGTCCAATTCAATCACAACCTCCATTTGAAGAAGATGATAGGACCCCAAATTTTTTGGGCTCGAGGAGATTGGGAGTGAAATCTAACGAAAGAGAGTATGATCAGAATGGGATGCTTCAAATGGAGCCACGGATGATGGAACAGAGTGCAGGAAGATCTCTTACGCTTCCTTTTTTCTGGGAGTGA 981 0.4485 MEWCPKESVWDQSNVEKAPVEKSVSIGDTETSNSKSSSSSSSSKRKRLCHKSPEKVNCSVDGCTFDLGTCREYHRRHRVCQPHSKTSCVLVKGQEQRFCQQCSRFQSLDEFDGFKRSCRRRLEAHNKRRRKPRPPPLPFSADYKGPRILQFGNHTSDDRYMSMWGAQSSGSYNCYPPILPKIEIDQQSVKGRGFSNIENMQVNWYNNNDDDDNNNNNNGPVLPLAAEAGIGGKNQRMPLDSALYLLSAFQAQSSSEFSMVESSIDCPIQSQPPFEEDDRTPNFLGSRRLGVKSNEREYDQNGMLQMEPRMMEQSAGRSLTLPFFWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1581 326 MobiDBLite consensus disorder prediction 25 43 - -
Mibi06g1581 326 MobiDBLite consensus disorder prediction 1 46 - -
Mibi06g1581 326 SUPERFAMILY SBT domain 56 135 IPR036893 GO:0003677|GO:0005634
Mibi06g1581 326 MobiDBLite consensus disorder prediction 123 144 - -
Mibi06g1581 326 Gene3D - 53 119 IPR036893 GO:0003677|GO:0005634
Mibi06g1581 326 Pfam SBP domain 58 131 IPR004333 GO:0003677
Mibi06g1581 326 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 29 255 IPR044817 GO:0003677
Mibi06g1581 326 ProSiteProfiles Zinc finger SBP-type profile. 55 132 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1581 Mibi-ChrMibi06 36148783 36149946 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1581 58 155 SBP-box Gene Family AT5G50670 54.808 3.98e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi06g1581 SBP 3.9e-28 No_clan