Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1562 ATGACTAAATCTGAATCAAATAGGATTTTACCTTTTTCAGAGCAAAAGCCCCCGCGATCTGGCCATAGAAGATCCAAAGACAACCTCTACAGTAAGCCTAAAGGCGAGAGCCAATCCTTAGGGGCACTAGCCAGGTGCAGGAAACCCCAAAAATTAGGAGTTTCGAATGCTCTACACAGTTGTGAGTTCAAGGTGAAGTACTCGAGAGAGCCTGACAATACCACCAAGTCATGCAAAGCCCGAGGTTCAGATCTCAGAGTTCATTTTAAGAACACAAGGGAGACAGCCTTCGCAATCAGGAAGTTGCCACTGGGAAAGGCCAAAAGGTATTTGGAAGATGTTATTGCTCACAAACAAGCAATTCCATTTAGACGATATTGTGGTGGAGTAGGCCGCACTGCTCAAGCCAAAAACCGTCATTCAAACGGTCAAGGACGCTGGCCTGTCAAGTCTGCAAAGTTTATCCTTGATCTGTTGAAAAATGCGGAAAGTAATGCAGAAGTGAAAGGTCTTGATGTAGATGCACTACACGTTTCCCACATTCAGGTAAATCAAGCTCAGAAGCAGAGGCGCCGCACCTACCGTGCTCATGGGAGAATTAACCCATACATGTCATCACCCTGCCACATTGAGCTGATTTTGTCTGAAAAGGAGGAGCCAGTCAAAAAGGAGCCCGAGACCCAGCTTGCTCCCAGAACCAAGAGCTCGTAG 711 0.4669 MTKSESNRILPFSEQKPPRSGHRRSKDNLYSKPKGESQSLGALARCRKPQKLGVSNALHSCEFKVKYSREPDNTTKSCKARGSDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALHVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAPRTKSS 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1562 236 MobiDBLite consensus disorder prediction 1 40 - -
Mibi06g1562 236 Pfam Ribosomal protein L22p/L17e 80 215 IPR001063 GO:0003735|GO:0005840|GO:0006412
Mibi06g1562 236 CDD Ribosomal_L22 78 214 IPR001063 GO:0003735|GO:0005840|GO:0006412
Mibi06g1562 236 ProSitePatterns Ribosomal protein L22 signature. 190 214 IPR018260 GO:0003735|GO:0005840|GO:0006412
Mibi06g1562 236 TIGRFAM uL22_arch_euk: ribosomal protein uL22 67 217 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi06g1562 236 Hamap 50S ribosomal protein L22 [rplV]. 63 217 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi06g1562 236 SUPERFAMILY Ribosomal protein L22 65 217 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mibi06g1562 236 MobiDBLite consensus disorder prediction 216 236 - -
Mibi06g1562 236 Gene3D Ribosomal protein L22/L17 64 236 IPR036394 GO:0003735|GO:0005840|GO:0006412
Mibi06g1562 236 MobiDBLite consensus disorder prediction 17 31 - -
Mibi06g1562 236 PANTHER 60S RIBOSOMAL PROTEIN L17 65 235 IPR005721 GO:0003735|GO:0006412|GO:0015934
Mibi06g1562 236 FunFam 60S ribosomal protein L17 64 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1562 Mibi-ChrMibi06 36056272 36059498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1562 65 234 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 89.412 3.75e-114 322