Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1558 ATGCCGGAGGAGACGACTACGATCGACTACGTGATGGAGGCTGCCTCTGGGCCCCACTTCTCCGGCCTCCGCCTTGACGGCCTCCTCGCCTCCCCTCCTTCCTCTTCTGCTTCTTCCCCTGCCCATCGATTCCCCTCCTCCTCTTCCCCTTTGGATTCATCCCTCCCCTCCGATTCAACCCCCACACGCCCCTTCGTTATCGGTGTTTCGGGAGGTACTGCTTCCGGCAAGACCACTGTGTGCGACATGATCATCCAACAGCTCCACGATCACCGCGTTGTGCTCGTCAATCAGGATTCTTTTTATCGTGGTTTGACGCCTGAAGAATCAGAACGTGCCCACGAGTACAATTTTGATCACCCCGATGCTTTTGACACCGAACAACTAGTAGAATGCATGGGAGAACTCATTAGTGGCCACTCAGTTCAAGTCCCGATTTATGATTTTAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATTTTGGAGGGAATTCTTGTTTTCCATGACCAACGTGTTCGCGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGTAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTTCTTCCATCAAAGAAATATGCTGATGTGATCATCCCCCGAGGAGGTGATAACCATGTTGCCATTGATCTGATTGTCCAGCATATCCATACAAAACTTGGTCAACATGATCTATGCAAAATATATCCGAATGTGTATGTTATTCAGTCAACGTTCCAGATAAGGGGGATGCACACATTGATTCGTGACAAAGACATATCGAAGCATGACTTTGTATTTTATTCAGACCGACTCATACGTCTGGTTGTTGAGCATGGCCTTGGCCATTTGCCATTCACTGAAAAGCAAGTGGTCACTCCAACAGGATCTGTCTATACTGGTGTTGACTTCTGCAAAAAATTGTGCGGTGTTTCTATTGTTCGAAGTGGTGAGAGCATGGAGAATGCTCTACGAGCATGCTGCAAAGGCATAAAAATTGGAAAGATTCTGATTCATAGAGATGGAGACAATGGAAAGCAGCTCATATACGAGAAGCTTCCCAAGGATATATCAGAACGGCATGTCTTGCTTCTAGATCCTGTCCTGGCTACTGGTAACTCCGCAAACCAAGCAATTGAGCTGCTCATACAGAAAGGAGTTCCAGAATCCCACATTATATTCCTGAACCTCATTTCTGCACCGGAGGGAATCCATTGTGTGTGTAAAAGGTTCCCATCCTTGAAAATCGTCACATCCGAGATTGACGTTGCCTTGAATGAAGAGTTCCGGGTTATCCCAGGATTGGGCGAGTTTGGTGATCGCTATTTTGGAACTGACGATTAA 1458 0.4643 MPEETTTIDYVMEAASGPHFSGLRLDGLLASPPSSSASSPAHRFPSSSSPLDSSLPSDSTPTRPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLVECMGELISGHSVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVCKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1558 485 SUPERFAMILY PRTase-like 267 484 IPR029057 -
Mibi06g1558 485 Gene3D - 268 483 IPR029057 -
Mibi06g1558 485 PANTHER URIDINE KINASE 58 394 - -
Mibi06g1558 485 FunFam Uridine kinase 61 267 - -
Mibi06g1558 485 Pfam Uracil phosphoribosyltransferase 282 483 - -
Mibi06g1558 485 PRINTS Uridine kinase signature 64 81 - -
Mibi06g1558 485 PRINTS Uridine kinase signature 196 206 - -
Mibi06g1558 485 PRINTS Uridine kinase signature 232 245 - -
Mibi06g1558 485 PRINTS Uridine kinase signature 210 221 - -
Mibi06g1558 485 PRINTS Uridine kinase signature 94 105 - -
Mibi06g1558 485 PRINTS Uridine kinase signature 139 154 - -
Mibi06g1558 485 MobiDBLite consensus disorder prediction 31 65 - -
Mibi06g1558 485 TIGRFAM udk: uridine kinase 65 264 IPR000764 -
Mibi06g1558 485 Gene3D - 61 267 IPR027417 -
Mibi06g1558 485 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 257 IPR027417 -
Mibi06g1558 485 CDD UMPK 66 264 IPR000764 -
Mibi06g1558 485 CDD PRTases_typeI 341 456 IPR000836 -
Mibi06g1558 485 FunFam Uridine kinase 268 483 - -
Mibi06g1558 485 Pfam Phosphoribulokinase / Uridine kinase family 66 252 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1558 Mibi-ChrMibi06 36016676 36021950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1558 1 485 PRT Gene Family AT5G40870 86.804 0.0 847