Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi06g1509 | ATGGCCTCCTTCATCGGAGTGTCCCCCACTTCTTCTCTTCCCGATATCTCTCTCAGACCTTCACCATCCTTCACTTCTTCAATCCCTTTCCCCACCCATCTTTCCCTCCACACTCCACTCTCAAAACCCAACACAAATCCCCTTTCTTTCAAACCCTCTCCCATCTTTCCCTCCAAAGTCATCAACTTTACTCGCCGCCAAGCCTTCATCGTCCGAGCAGCGAGGGGAAAATTCGAAAGGAAGAAACCCCATGTTAATATCGGCACGATCGGTCACGTTGACCATGGTAAGACTACTCTCACAGCTGCTCTTACCATGGCTTTAGCTTCTATGGGTAAAAGTGCACCCAAGAAGTACGATGAAATTGACGCAGCCCCTGAAGAGAAAGCTCGAGGGATTACGATCAACACTGCGACTGTTGAGTATGAAACTGAGAGTAGACACTATGCTCATGTGGATTGCCCTGGGCATGCTGATTATGTGAAGAATATGATCACTGGTGCGGCGCAAATGGATGGTGCGATCTTGGTTGTTTCAGGGGCTGATGGGCCAATGCCTCAGACTAAAGAGCATATTTTGTTGGCGAAACAAGTGGGTGTGCCTAATATTGTTGTTTTTTTGAATAAACAGGATCAGGTTGATGATGAGGAGCTTCTTCAATTGGTGGAATTGGAAGTGAGGGAGCTTTTGACTCTGTATGAGTTCCCAGGTGATGATGTGCCTATTGTTTCTGGTTCTGCATTGTTGGCTTTAGAGGCATTGATGGCGAATCCTAAGATCAATAGAGGAGAAAATCAATGGGTTGATAAGATTTATGAATTGATGGATGCTGTTGATAGTTATATTCCAATCCCACAGAGGCAAACTGATTTGCCCTTCCTTATGGCGATTGAAGATGTGTTTTCCATTACTGGTCGTGGTACTGTGGCAACAGGGCGTGTTGAGAGGGGTACAGTGAAGATTGGGGACTCTGTTGATATAGTTGGTGTTAAAGAAACTCGTACAACTACAGTTACTGGGGTTGAGATGTTCCAAAAAACACTTGATGAAGCAATTGCAGGAGATAATGTGGGGCTTTTACTTAGGGGGATTCAGAAAACAGACATTCAAAGAGGAATGGTTATTGCCAAACCTGGAGCAATTAAGCCCCATACGAAGTTTACTGCTATTGTTTATGTGCTGAGAAAGGAGGAAGGAGGTAGGCATTCGCCATTTTTTGCTGGATACAGGCCTCAATTCTACATGAGGACTACTGATGTTACTGGGAAGGTTTCTAAAATTATGAATGATAAGGATGAAGAATCTAAGATGGTCATGCCTGGAGACCGAATAAAGATGGTTGTTGAGCTGATTTTTCCCGTAGCCTGTGAAAAAGGAATGAGGTTTGCAATCAGAGAAGGTGGAAAGACTGTGGGAGCTGGAGTCATCCAGTCCATAATCGAATGA | 1446 | 0.4461 | MASFIGVSPTSSLPDISLRPSPSFTSSIPFPTHLSLHTPLSKPNTNPLSFKPSPIFPSKVINFTRRQAFIVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASMGKSAPKKYDEIDAAPEEKARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLTLYEFPGDDVPIVSGSALLALEALMANPKINRGENQWVDKIYELMDAVDSYIPIPQRQTDLPFLMAIEDVFSITGRGTVATGRVERGTVKIGDSVDIVGVKETRTTTVTGVEMFQKTLDEAIAGDNVGLLLRGIQKTDIQRGMVIAKPGAIKPHTKFTAIVYVLRKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSKIMNDKDEESKMVMPGDRIKMVVELIFPVACEKGMRFAIREGGKTVGAGVIQSIIE | 481 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi06g1509 | 481 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 80 | 308 | IPR027417 | - | |
Mibi06g1509 | 481 | SUPERFAMILY | Translation proteins | 287 | 383 | IPR009000 | - | |
Mibi06g1509 | 481 | Hamap | Elongation factor Tu [tuf]. | 73 | 481 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Mibi06g1509 | 481 | Pfam | Elongation factor Tu GTP binding domain | 82 | 283 | IPR000795 | GO:0003924|GO:0005525 | |
Mibi06g1509 | 481 | PANTHER | ELONGATION FACTOR TU-RELATED | 74 | 480 | - | - | |
Mibi06g1509 | 481 | FunFam | Elongation factor Tu | 73 | 285 | - | - | |
Mibi06g1509 | 481 | Gene3D | - | 74 | 285 | IPR027417 | - | |
Mibi06g1509 | 481 | FunFam | Elongation factor Tu | 420 | 480 | - | - | |
Mibi06g1509 | 481 | FunFam | Elongation factor Tu | 288 | 416 | - | - | |
Mibi06g1509 | 481 | PRINTS | GTP-binding elongation factor signature | 86 | 99 | IPR000795 | GO:0003924|GO:0005525 | |
Mibi06g1509 | 481 | PRINTS | GTP-binding elongation factor signature | 203 | 212 | IPR000795 | GO:0003924|GO:0005525 | |
Mibi06g1509 | 481 | PRINTS | GTP-binding elongation factor signature | 150 | 160 | IPR000795 | GO:0003924|GO:0005525 | |
Mibi06g1509 | 481 | PRINTS | GTP-binding elongation factor signature | 130 | 138 | IPR000795 | GO:0003924|GO:0005525 | |
Mibi06g1509 | 481 | PRINTS | GTP-binding elongation factor signature | 166 | 177 | IPR000795 | GO:0003924|GO:0005525 | |
Mibi06g1509 | 481 | Gene3D | Translation factors | 288 | 416 | - | - | |
Mibi06g1509 | 481 | TIGRFAM | small_GTP: small GTP-binding protein domain | 85 | 217 | IPR005225 | GO:0005525 | |
Mibi06g1509 | 481 | Gene3D | Translation factors | 420 | 480 | - | - | |
Mibi06g1509 | 481 | Pfam | Elongation factor Tu C-terminal domain | 381 | 479 | IPR004160 | - | |
Mibi06g1509 | 481 | CDD | EF_Tu | 83 | 285 | IPR041709 | - | |
Mibi06g1509 | 481 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 82 | 286 | IPR000795 | GO:0003924|GO:0005525 | |
Mibi06g1509 | 481 | TIGRFAM | EF-Tu: translation elongation factor Tu | 74 | 481 | IPR004541 | GO:0003746|GO:0005525|GO:0006414 | |
Mibi06g1509 | 481 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 123 | 138 | IPR031157 | - | |
Mibi06g1509 | 481 | CDD | EFTU_III | 382 | 476 | - | - | |
Mibi06g1509 | 481 | CDD | EFTU_II | 293 | 379 | IPR033720 | - | |
Mibi06g1509 | 481 | Pfam | Elongation factor Tu domain 2 | 307 | 375 | IPR004161 | GO:0005525 | |
Mibi06g1509 | 481 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 381 | 480 | IPR009001 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi06g1509 | Mibi-ChrMibi06 | 35608633 | 35610078 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi06g1509 | 80 | 479 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 30.337 | 1.46e-46 | 166 |