Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1503 ATGTTAACTATCCTCGGATACTTAAGTGTAGCAGCAATCAGTAAACTGGAAAGGTACCATGCATCCATGTTCGATCAAAGAATTGCATGTTCTGGTGTGGAATGCGATTTTGGTTTCATCTTCTGGCTCTTCGATAGTATGGCTAGGAGCTGGCTTATTGATATTGGAGGCTTTGCAAAGAAAGTGAAAAGCAGTTCTCTGCCCTCAGCTGAGCAAATCAAAGACTGTGGGGCATATCGTGAATGTCCAAATTGTCACTGCCATATTGATAATAGTGATGTTCTCCCCGAGTGGCCTGGCTTTCCTGTTGGTGTAAAATTTGATCCTTCTGATATAGAGCTCTTAGAACATTTAGCAGCAAAATGTGGCATTGGAAATGCAGAGCCACACATGTTTATCCATGAGTTCATTCCAACTCTGGAGAGTACTGAGGGTATTTGCTACACTCATCCAGAAAATCTTCCAGGTGCTAAAAAAGATGGGAGTAGTGTCCATTTCTTTCATAGAACAATTAATGCCTATACATGTGGTCAACGAAAGCGTCGAAAGATTCATCATCATGATGGTGCTACTGAGGAGCATGTGCGGTGGCATAAGACTGGTAAGACCAAATCTTTGATAGAAGATGGCATACACAAAGGCTTTAAAAAGATCATGGTTCTTTATGTAAGACCTGAGAAAGGTTCAAAGCCATATAAATCCAATTGGGTGATGCATCAATACCATCTGGGGACAGAAGAAGAGGAAAAGGAAGGTGAATATGTGGTCTCAAAGATTTTTTATCAAAAGAAGCAGCTCGAGAAAAATGATGATAATCCATTAGTTGAAGAATCGGATAATATGACATCACGAACAAGTCCAAGAACCCCAAATCCAAATCCCCGCAATCCACCTCGACCAGGAAATTCTGCCGAGTGTGATGATAATCTCGATGAGAAAATACTTCTGTCACTTAACAAGGATGGCAAGTCTCTCCCTGGACAGCCAAGTGCCCTACCAATTGATATCCAGGATGAGGATGATATAAGTGGCCCTGCATGGTTGGCTGGTGAATCACAGGCTGTCGAAAACTCTGACTTTGATGGCTTAGACGACTTATTATGCAATGAGATCTTTGATTCCTGTGCTCAATTAAATGACTCTGGAATGAACACCACCACTGTCAATGGTTTTGCCGGCAACACAAATTTGTTAGCCGGAAATGACAATGCATCCTTTGGAATCTCTGACCTGGATAACCTGGAATTGGATACTCCTCCTGATTTCCAACTTTCTAACTTGCAATTTGCTTCACAAGACAGTGTACTTGAATGGATAGACAGAGACGTTACTGGCTATCTCAGAAATTTACAGAAGCATTGCTTGAAGCTCTCTTGCTCTATCCTCCAATCCAGTCTCTCCAAGAATGCCATATCTTTCGGACATACATCTCAGCATATGTCAGGCTACATAATTCAGCCATACAACGAAGTTACTTCTTATTCTTATGTCAAGCCATCAAATTCATTCAATGTATCATCACGAACAATGTCAACATCGAAAGGTAGAAGCATGCGGAGCAAGGTGGAAAGGCGAATGCAGAAAGAGTCTGGTAAAACATTAAGGGAGATTCGTAGAGCTAAAAAATTGAAAAAGAAGCTAATGACTGAGGAGGAGAGGCTTATTTACAATCTCAAAAGAGCCAAGAAGAAAGTGGCATTGCTGCTGCAAAAACTTAAGAAATATGAGCTGCCAGAGTTGCCTCCTCCTCGACATGATCCTGAACTATTAACACCTGAACAACTTCAGGCTTTTAAAAAAATTGGATTCAGGAATAAAAATTATGTTCCAGTTGGTGTCCGAGGAGTTTTTGGTGGGGTGGTGCAAAATATGCATCTCCATTGGAAGTTTCATGAGACTGTTCAAGTTTGTTGTGACAACTTCCCCAAAGAAAAAATCAAAGAAATGGCTACAATGCTTGCTAGATTGAGCGGTGGTATTGTGATAAACATTCATAATGTGAAAACAATTATCATGTTTCGAGGCAGAAACTATCGCCAACCCAAAAATTTGATACCTATTAACACCCTTACGAAGAGGAAGGCTCTTTTTAAGGCCAGATTTGAGCAAGCTCTTGAATCTCAAAAGTTAAACATTAAGAAAATAGAGCAGCAGCTCCGGCGGATGGGTGTAAATCCTGAGGATCCAGCTGCCATGGCCAGCATCCATAGAGTTGCTTCAACGTTCTTCAATGCTATTGACAAGAAAGAAGGAACTCCTTATGTTTTTCAGGAAGGCAAGGTGTCAGCTAAAGGAACTGTTGAAGATTTGGAAGAGCCGGAGCCTTCAGTCGATAGTGACCAGGAGGAGCTAGACCGATTCATTGCCGAGATAGAAGATGCTGCAGATAAAGAATATGAAGCTGAAGAGGCAAAAGAAAAAGAAGAATTTGGCAGAATTAGATACCTGAACAGAGAAGATTTTGGAGGAAGATATAGAAAATTTGATGGGCCTGGAAATGATGATTATAATGGTGAGTTTAGAGGTTCAAGGTTTCGGCAGACTTCACATGCTAAGCAGCTGGCTAGTGATAGTGATGTTGACAACAATACACTCTCTGATGACGATGATGATGATGACGGTGGTGGGGAGTGGGTTGCCGATCCTGGCAATGATTCTGATAGTTTTAGTGAGGCTAAAGGCAGGTTCAAGTCAAGTAAGATGGACAGGGGGAAAAGAAATAATTTTGGCAGGGCCCAAATTAATGAAAATTTAAGTAGACACGAAGGTAAATTTAGGAAAAATTCGACCATAGTTGATTCTGACTCGGAAGGTATGTTTAGTGATCTTGACAATGCAATGTGGGAGTCTGACGAGGAAGAAAATGAATCATCAAGGCAGTTCAGTGGCAGTGGTAATTACAAGAGCAACAGTGAAGACAAATACGCATATCACACGAAGAGGGACAGGAGAAATGTTGTGAGGCATCATGGGGTTGGTGGTGATGACTCTGACCAAAACTGGAATGGGTTTGATGTTCCAAGAAGTGTGAAAGGGAAGCAAGGCAGGTTTGGAAGAAGAGCTGATATAAACCAACGGTCCATTAGTTTAGAATCTGGATCCGAAGATATAGCTAGTGACTTGGAAAACAGGATGTGGCGTTCAGACTCGGAGGAAGAGTTTAAATACACTTGGAGGGATAGTGGGCACGAAGAGAGGAAAAATGACAATAGCCATAAGAGAAGCCCAAAACATGAAGATGAGACTTGGGACAGTGACTAG 3261 0.4152 MLTILGYLSVAAISKLERYHASMFDQRIACSGVECDFGFIFWLFDSMARSWLIDIGGFAKKVKSSSLPSAEQIKDCGAYRECPNCHCHIDNSDVLPEWPGFPVGVKFDPSDIELLEHLAAKCGIGNAEPHMFIHEFIPTLESTEGICYTHPENLPGAKKDGSSVHFFHRTINAYTCGQRKRRKIHHHDGATEEHVRWHKTGKTKSLIEDGIHKGFKKIMVLYVRPEKGSKPYKSNWVMHQYHLGTEEEEKEGEYVVSKIFYQKKQLEKNDDNPLVEESDNMTSRTSPRTPNPNPRNPPRPGNSAECDDNLDEKILLSLNKDGKSLPGQPSALPIDIQDEDDISGPAWLAGESQAVENSDFDGLDDLLCNEIFDSCAQLNDSGMNTTTVNGFAGNTNLLAGNDNASFGISDLDNLELDTPPDFQLSNLQFASQDSVLEWIDRDVTGYLRNLQKHCLKLSCSILQSSLSKNAISFGHTSQHMSGYIIQPYNEVTSYSYVKPSNSFNVSSRTMSTSKGRSMRSKVERRMQKESGKTLREIRRAKKLKKKLMTEEERLIYNLKRAKKKVALLLQKLKKYELPELPPPRHDPELLTPEQLQAFKKIGFRNKNYVPVGVRGVFGGVVQNMHLHWKFHETVQVCCDNFPKEKIKEMATMLARLSGGIVINIHNVKTIIMFRGRNYRQPKNLIPINTLTKRKALFKARFEQALESQKLNIKKIEQQLRRMGVNPEDPAAMASIHRVASTFFNAIDKKEGTPYVFQEGKVSAKGTVEDLEEPEPSVDSDQEELDRFIAEIEDAADKEYEAEEAKEKEEFGRIRYLNREDFGGRYRKFDGPGNDDYNGEFRGSRFRQTSHAKQLASDSDVDNNTLSDDDDDDDGGGEWVADPGNDSDSFSEAKGRFKSSKMDRGKRNNFGRAQINENLSRHEGKFRKNSTIVDSDSEGMFSDLDNAMWESDEEENESSRQFSGSGNYKSNSEDKYAYHTKRDRRNVVRHHGVGGDDSDQNWNGFDVPRSVKGKQGRFGRRADINQRSISLESGSEDIASDLENRMWRSDSEEEFKYTWRDSGHEERKNDNSHKRSPKHEDETWDSD 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1503 1086 SUPERFAMILY NAC domain 85 262 IPR036093 GO:0003677|GO:0006355
Mibi06g1503 1086 Gene3D NAC domain 111 267 IPR036093 GO:0003677|GO:0006355
Mibi06g1503 1086 ProSiteProfiles CRM domain profile. 588 685 IPR001890 GO:0003723
Mibi06g1503 1086 MobiDBLite consensus disorder prediction 917 931 - -
Mibi06g1503 1086 PANTHER GROUP II INTRON SPLICING FACTOR CRS1-LIKE 453 864 IPR040286 -
Mibi06g1503 1086 Coils Coil 544 564 - -
Mibi06g1503 1086 Coils Coil 698 725 - -
Mibi06g1503 1086 Pfam CRS1 / YhbY (CRM) domain 590 674 IPR001890 GO:0003723
Mibi06g1503 1086 ProSiteProfiles NAC domain profile. 101 262 IPR003441 GO:0003677|GO:0006355
Mibi06g1503 1086 MobiDBLite consensus disorder prediction 888 909 - -
Mibi06g1503 1086 Pfam No apical meristem (NAM) protein 102 243 IPR003441 GO:0003677|GO:0006355
Mibi06g1503 1086 MobiDBLite consensus disorder prediction 862 878 - -
Mibi06g1503 1086 SMART CRS1_YhbY_2 590 674 IPR001890 GO:0003723
Mibi06g1503 1086 MobiDBLite consensus disorder prediction 1051 1086 - -
Mibi06g1503 1086 FunFam NAC domain-containing protein 8 110 266 - -
Mibi06g1503 1086 MobiDBLite consensus disorder prediction 842 861 - -
Mibi06g1503 1086 SUPERFAMILY YhbY-like 589 683 IPR035920 -
Mibi06g1503 1086 MobiDBLite consensus disorder prediction 269 307 - -
Mibi06g1503 1086 Gene3D - 589 685 IPR035920 -
Mibi06g1503 1086 Coils Coil 777 797 - -
Mibi06g1503 1086 MobiDBLite consensus disorder prediction 824 1021 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1503 Mibi-ChrMibi06 35558937 35569770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1503 78 264 NAC Transcription Factor Family AT4G28500 52.910 3.26e-57 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi06g1503 NAM 4.9e-19 No_clan