Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1501 ATGGCGACTCCTGTCAATGGAGTGGCGCATTTATCAGAGGTTCAGAATTCAATTTCTGCTATAAATTCCAATCCTCCTTCATCACTTTGGATTCCTCAGCCGTTTCTGGCTCCTCCTATAAGAACATCTAGAAACCATGGGGTTTCTTCTACATCCTATTTTACTGGTCATGATGATGACTATGCAACGAAGCTCATAAACCATCACAAGAATTATGCAATCAATCAAATGCATTCTTATCTAGAGTCCAACATTGCGCGGCACGAAGAGTTACCAAATGCGTTAAGGCTGTATTACAAATATGGTGGAAAATCTGGCTATTCAAGCCTCCCTGAAACTGGAGAAACTTGTTTTGGGAAGAACTTTTGTGCCATCGAACCATCTGATAATTCCACCAATTGTGATTCAAGTGGCAGCATTTTCGAATATGGAGGCCCATCAGAGGTTAATTTTTGCTCAAGTCCTCAGAGTAGTTTCTATTCTGCCACTTTCTGTTCTGAAGCCAAACGAAGTTCTTCTAATAATACTGAAATCAGTGAAGGTGTTGACCAGTCAAGTGAGTTTGGTGGAGTTAATGATTTCTGTTATTATAACGAGAGCAGGATGAACAGCATCTGTAGAATGAGTAGTGTAAGTGATTTTACTGATTCAAGCAGCTACAGTAATTTTAACAGCCCTTGGTGTAGACCCCGCAAGGCAAATGATGTAAGATGGGAAGCAATTCAAGCGATCCGAGTACGTGATCAGATATTGGAAATGAGACATTTCAGGGTGTTGAGGACATTGGGATGTGGAGACATAGGAAAAGTTCGTCTTGCAGAGTTGAGTGACACAGGACTCTATTTTGCCATGAAATTTATGAATAAACAAGAGCTAGCAAGCCGCAAGAGGCTTCTGAGGGTTCGGACAGAAAGAGAGATATTGCAGTCTTTGGATCATCCATTTCTGCCCACATTATATGCACACTTTGAGACAGACGCATTCTCTTGCTTGGTAATGGAGTTCTGCCCTGGTGGGGACCTGCATGCACTCAGGCAAAGACAACCTGGGAGATATTTCTCAGAACATGCTGCCAGGTTCTATGCGGCAGAGGTGCTTCTTGCTTTGGAGTACCTGCACATGCTGGGGATCATATACCGAGACCTAAAACCTGAGAATGTCTTGGTGAGAGAAGATGGTCACATAATGCTGTCAGATTTTGACCTCTCTCTGAGGTGCCCTGTCAGCCCAACTCTAGTAAGATCATCAAACCCTTCCACAAAAAGCTCAAGATACTGTTCTACTCCACCACCTGCCTCCTTTGAGCCGAATTGTGTCATGAAGCTGAGTTGCATCCAATCTGCATGTTTCACAACCCGTAAACGATCTAGAAAGCTCAAGAATTACCACAAGTTGTTGAAAGCCAGAATTGAAATGCCTCCTCCTCATAATCATCATCATCATCATCATCATCAGGTGACCTCTCTTCCTGAGCTCATTGCAGAACCAACAAATGCACGTTCAATGTCCTTTGTGGGCACTCATGAGTACTTAGCTCCAGAGATCATTAAAGGACAAGGGCATGGCAGTGCTGTGGATTGGTGGACTTTTGGGATATTCCTATATGAGCTTCTCTTTGGTAGAACTCCTTTCAAAGGTTCAGCAGATAGAGCCACTCTGCTCAATGTGGTGGGTCAGCCCTTAAGATTCCCAGAATCACCTAGTGTCAGTTTTGCTGCTAGAGACCTTATAAGGGGTTTGCTTGTGAAAGAGCCAAACCATCGTCTTGCTTATAGACGTGGAGCTTCTGAAATCAAACAACATCCTTTCTTCCAAGATGTTAACTGGGCACTCATTCGCTGCACTGTTCCTCCTGAGGTCCCCAGACAGGCCATGATGAAAAATATGGCTGCCACTCCTGTTTTGAGGCCTTCTTCTGGCAAATATTTAGATTTTGATTACTTTTGA 1947 0.4345 MATPVNGVAHLSEVQNSISAINSNPPSSLWIPQPFLAPPIRTSRNHGVSSTSYFTGHDDDYATKLINHHKNYAINQMHSYLESNIARHEELPNALRLYYKYGGKSGYSSLPETGETCFGKNFCAIEPSDNSTNCDSSGSIFEYGGPSEVNFCSSPQSSFYSATFCSEAKRSSSNNTEISEGVDQSSEFGGVNDFCYYNESRMNSICRMSSVSDFTDSSSYSNFNSPWCRPRKANDVRWEAIQAIRVRDQILEMRHFRVLRTLGCGDIGKVRLAELSDTGLYFAMKFMNKQELASRKRLLRVRTEREILQSLDHPFLPTLYAHFETDAFSCLVMEFCPGGDLHALRQRQPGRYFSEHAARFYAAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCPVSPTLVRSSNPSTKSSRYCSTPPPASFEPNCVMKLSCIQSACFTTRKRSRKLKNYHKLLKARIEMPPPHNHHHHHHHQVTSLPELIAEPTNARSMSFVGTHEYLAPEIIKGQGHGSAVDWWTFGIFLYELLFGRTPFKGSADRATLLNVVGQPLRFPESPSVSFAARDLIRGLLVKEPNHRLAYRRGASEIKQHPFFQDVNWALIRCTVPPEVPRQAMMKNMAATPVLRPSSGKYLDFDYF 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1501 648 Gene3D Phosphorylase Kinase; domain 1 254 339 - -
Mibi06g1501 648 FunFam serine/threonine-protein kinase D6PK-like 340 407 - -
Mibi06g1501 648 PANTHER FLIPPASE KINASE 1-RELATED 168 626 - -
Mibi06g1501 648 SUPERFAMILY Protein kinase-like (PK-like) 234 626 IPR011009 -
Mibi06g1501 648 SMART serkin_6 256 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1501 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 377 389 IPR008271 GO:0004672|GO:0006468
Mibi06g1501 648 FunFam serine/threonine-protein kinase D6PK-like 499 622 - -
Mibi06g1501 648 Gene3D Transferase(Phosphotransferase) domain 1 340 408 - -
Mibi06g1501 648 Pfam Protein kinase domain 257 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1501 648 Pfam Protein kinase domain 501 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1501 648 FunFam Serine/Threonine Kinase 254 340 - -
Mibi06g1501 648 CDD STKc_phototropin_like 254 624 - -
Mibi06g1501 648 Gene3D Transferase(Phosphotransferase) domain 1 498 622 - -
Mibi06g1501 648 ProSiteProfiles Protein kinase domain profile. 256 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1501 Mibi-ChrMibi06 35524748 35527278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1501 170 648 AGC Kinase Gene Family AT5G47750 62.103 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi06g1501 Pkinase 8.6e-37 CL0016