Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1493 ATGCCCTCTCTTCAATTCCTCTCCCCCGTAGCTCTCGATCGTCCTTTGCCACTCTTGCTCGGAAGCAATTCGTCGTCGTTTTGGGCCACAGATTGGTGCCTTATTAAACGAAATAATCCAATTACTGTTAGAAAGAAGCTTCGTTTCAATGGCGGAACTGTTAGGGTTTTCGCTATGTCTGGGAGTTTGTCTGCGTTTAATAAGATGAATCTCAACGAGTATTTGGTCACTCTGGAGAAACCACTTGGTATCCGGTTCGCCCTCACTTCTAACGGCAAAATCATCGTTCACTCCCTCAAGAAAGGGGGTAATGCAGAGAAGTCGAGGATTATAATGGTGGGGGACACTTTGAAGAAAGCTGGTGACTCATCGAAAGATTCGCTTACCGAGATTAAGAACGCTGAAGATGCACAGAATATTTTAAAGGAGCAGACTAATCCTTTAAGCATGATTCTGGAGAGGCCCAAATCTCCTTTTCCTATTCATTTACTGCACAAGATAAATGACTCTGAAGTGAAGTTCAACATAGGCCAAGTTCCTATTGCCACCTGGGACAAGACATTATTGGCTTCAAATTTACAGCCAGCTGTTGAAAGCTCTGGAAAGAGTGGTTTTTCTACCTTCAACTCAAAGTTTCTAGCACCGAAAGGAAGCAAGTTATTGGGCAATCCAAATGAACATGCCATCATTAATGAGGAGATGAAATTCTTTGGTGATGAAGAGTATGATGAAGGAGAGTGGGCTCATGGAAGTTTCCCTCTTGAGGAATATGTCAAAGCTCTGGAACGTTCAAAAGGCGAGATGTACTATGATCACTCCCTTGGTATGCGCTATACTAAGATTTCAGAGCAAATATATGTGGGATCGTGTATACAAACAGAAGCTGATGTGGAAACATTGTCAGAAGTTGAGGGAGTCACTGCTGTTCTGAACTTCCAAAGTGCAACTGAAGCTGAGAATTGGGGAATCGATTTCAAATCTATTAATGAGTCATGTCAAAGGAATAATATCCTTATGATCAACTATTCTATACGGGCGGGGGATTCTTACGATATGAGGAAGAAATTACCATTTTGTGTGGGGCTTCTCTTGCGGTTGCTGAGGAAAAACCATCGCGTTTTTGTTACATGTACTTCTGGAATTGATCGAGCTCCTGCTTGTGTGATTGCTTACCTGCACTGGATTACAGATATTTCCCTCCATGCGGCTTATACATGGGTCACTGGGATGTACACATGCAGGCCTGACAGGCCTGCAATCGCCTGGGCAACATGGGATCTTATAGCTATGGTTGAAAAGGGTAACCATGATGGACCCCCTACACATGCTGTCACATTTGTATGGAATGAGAGTGAGGGACAGGATGTAACATTGGTGGGAGATTTTACTGGAAATTGGAAAGAACCAATCAAAGCATTACACAAGGGTGGAATGAGATATGAAGCAGAAGTTAAACTTCCTCAAGGAAAGTACTACTATAAGTTTATTGTAAATGGAAACTGGAAGCATTCAACTGCTTCACCGTCAGAAAGGGATGACAGGGGGAACGTTAACAATGTAATTGTGATTGGTGATACTGCTAGCGTTAGGCCTTCTGTTCAACACCAGCCGAAAGATGCTAACATTGTGAAGGTGATAGAGAGGCCTCTAGATGAGAAAGAGCGGTTCAAGCTGGCGAAAGCAGCTCGCTGCATTGCCTTCAATGTGTGTCCAATTACATTAAATCCCAAGTCGCAAGTAGTTGCATAG 1749 0.4317 MPSLQFLSPVALDRPLPLLLGSNSSSFWATDWCLIKRNNPITVRKKLRFNGGTVRVFAMSGSLSAFNKMNLNEYLVTLEKPLGIRFALTSNGKIIVHSLKKGGNAEKSRIIMVGDTLKKAGDSSKDSLTEIKNAEDAQNILKEQTNPLSMILERPKSPFPIHLLHKINDSEVKFNIGQVPIATWDKTLLASNLQPAVESSGKSGFSTFNSKFLAPKGSKLLGNPNEHAIINEEMKFFGDEEYDEGEWAHGSFPLEEYVKALERSKGEMYYDHSLGMRYTKISEQIYVGSCIQTEADVETLSEVEGVTAVLNFQSATEAENWGIDFKSINESCQRNNILMINYSIRAGDSYDMRKKLPFCVGLLLRLLRKNHRVFVTCTSGIDRAPACVIAYLHWITDISLHAAYTWVTGMYTCRPDRPAIAWATWDLIAMVEKGNHDGPPTHAVTFVWNESEGQDVTLVGDFTGNWKEPIKALHKGGMRYEAEVKLPQGKYYYKFIVNGNWKHSTASPSERDDRGNVNNVIVIGDTASVRPSVQHQPKDANIVKVIERPLDEKERFKLAKAARCIAFNVCPITLNPKSQVVA 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1493 582 Pfam Glycogen recognition site of AMP-activated protein kinase 444 525 IPR032640 -
Mibi06g1493 582 SUPERFAMILY PDZ domain-like 56 161 IPR036034 GO:0005515
Mibi06g1493 582 Gene3D Protein tyrosine phosphatase superfamily 270 535 IPR029021 -
Mibi06g1493 582 ProSiteProfiles PDZ domain profile. 75 156 IPR001478 GO:0005515
Mibi06g1493 582 Gene3D Immunoglobulins 431 527 IPR013783 -
Mibi06g1493 582 SUPERFAMILY E set domains 441 524 IPR014756 -
Mibi06g1493 582 Gene3D - 74 155 IPR036034 GO:0005515
Mibi06g1493 582 CDD DSP_laforin-like 276 422 IPR045204 GO:0019203|GO:0046838
Mibi06g1493 582 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 269 409 IPR029021 -
Mibi06g1493 582 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 23 574 - -
Mibi06g1493 582 CDD E_set_AMPKbeta_like_N 444 523 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1493 140 578 Protein tyrosine phosphatase (PTP) family AT3G01510 63.556 0.0 605