Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1482 ATGGGATCTTTAACCGTCTCTCCGGTTGTCGAAACTATGGAATCTGGCAATCTTTTCTTTGAACCTTCTTCCGCTAGCCGTGGGACTATGCTGTTCCTTCGAAGTGGTGATATTAGGTTTGGAGGAAGTTCGATGGTGAGCGCGGATGAAACATCTAAGAAACGACCTTTCTTTAGCTCACCGGAGGAACTGTTCGACGAGGAATATTATGATGAGCAACTGCCAGAGAAGAAGCGTCGTCTCACACCCGAGCAGGTTCTTCTGTTGGAGAAAAGCTTTGAGGCGGAGAACAAACTGGAGCCAGTACGGAAGACCCAGTTAGCCAATAAGCTGGGATTGCAACCTAGGCAGGTTGCCGTCTGGTTTCAGAACCGCAGGGCTCGGTGGAAGACCAAACAACTTGAAAGGGATTTTGATACTCTCAAGTCTTCCTACGACTCCCTCCTTTTGAAACATGAATTCACCGTGAAGGAGAATGAAAAGCTTAAATCTGAGGTGTTATCATTGAATGAGAAGCTTCAAGCAAAGGATGTACCCATAGCACCAATATTTGATCAAAAAATTGAGCCCCTTGCAGTGGAAACAGCCCAATTATCAGCCCTACCATTCAGCATGAGGGTGGAGGATCGTCTGAGCACGGGGAGTGGTGGAAGCTCAGTTGTGGACAGTAAAGATTCATACTTTCCGGCGGACAGCTATACCGGATACATCGCCTGCGTCAACGGGGTTCAGTCGGAGGATGATGATGGGAGTGATGATGGACGGAGCTACTTCTCAGATGTGTTTGTGGCTCCTGAATCACATGGCCAAAACCATGAGGCAGGGGACGCATTTGGTTGGTCGGTGTGGTCTTAA 855 0.483 MGSLTVSPVVETMESGNLFFEPSSASRGTMLFLRSGDIRFGGSSMVSADETSKKRPFFSSPEELFDEEYYDEQLPEKKRRLTPEQVLLLEKSFEAENKLEPVRKTQLANKLGLQPRQVAVWFQNRRARWKTKQLERDFDTLKSSYDSLLLKHEFTVKENEKLKSEVLSLNEKLQAKDVPIAPIFDQKIEPLAVETAQLSALPFSMRVEDRLSTGSGGSSVVDSKDSYFPADSYTGYIACVNGVQSEDDDGSDDGRSYFSDVFVAPESHGQNHEAGDAFGWSVWS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1482 284 Gene3D - 71 140 - -
Mibi06g1482 284 PRINTS Lambda-repressor HTH signature 112 128 IPR000047 GO:0003677
Mibi06g1482 284 PRINTS Lambda-repressor HTH signature 103 112 IPR000047 GO:0003677
Mibi06g1482 284 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 66 218 IPR045224 GO:0003700
Mibi06g1482 284 FunFam homeobox-leucine zipper protein ATHB-6-like 80 126 - -
Mibi06g1482 284 SUPERFAMILY Homeodomain-like 70 134 IPR009057 -
Mibi06g1482 284 ProSitePatterns 'Homeobox' domain signature. 107 130 IPR017970 GO:0000981|GO:0006355
Mibi06g1482 284 ProSiteProfiles 'Homeobox' domain profile. 72 132 IPR001356 GO:0003677
Mibi06g1482 284 Pfam Homeodomain 77 130 IPR001356 GO:0003677
Mibi06g1482 284 SMART HOX_1 75 136 IPR001356 GO:0003677
Mibi06g1482 284 CDD homeodomain 77 133 IPR001356 GO:0003677
Mibi06g1482 284 Pfam Homeobox associated leucine zipper 132 174 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1482 Mibi-ChrMibi06 35256831 35259277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1482 13 283 Homeobox Transcription Factor Family AT3G01470 52.128 3.27e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi06g1482 Homeodomain 3e-17 CL0123