Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1481 ATGGAACTCACCGATTCCGGCGACGAACTCAGCCACAGCCACCACAAGCTTTCTCAAGATTCTCGCTCTGGACTCGGAATCGACCTCAATGAGATCCCCTCCCCTTCTTTCACCGAAACCCTACCTGACTCCATCGATATCGTTCGCGCCTACCACGAGAACCCTCCGCCTCCCCCCGGTGGTCCCGCCGGGATTCCCGGCGACGCACGTGGCTCAGTTTGTGGCTCCTGTGGCAAGCCCGAGGCGCGAGGTCATGTTGTTGTCTGCGATGGCTGCGAGAAAGGTTACCATTTGGGCTGCGCCGGAATGCGTGGCCGTCAGGCCGTGAATCTCGATGAATGGGTTTGTGGAGAGTGTGTGTCTAGTGGGGTTAAGAGTAAGCGTTGGCCATTGGGTGTTAAGTCCAAGCATCTTCTGGATATCAATGCTTCTCCACCTAGCGATGCTGATGGAGAGGGTAGTGAAGAATTGCAGGATTTGAGAAAGCATACTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGTGCCTCGTTGACATATTCAAACTTCGTCAATGGTAATGCTATTGGCTTACAAAAAGCATCTGGTGTTGTGACACATGCTGTAAGAGTGGGTTTTGAGGATGTATTGAATCATACACAATCTGTGACTAGAATTTTTGGGGAGGTAGATATGGGTTTGCCTCCTGGAAAGCATAGGAATAGTAAAACTACAGCTAGTGGGAATCCAGGAGAGTTAATTTTGCAAGCTCTCAGAGAGTTTATATCTGAAAGGCGTGGTGTTCTGGAGGAAGGCTGGAAAGTGGAGTTTAGACAACCAACGGGGGGCTCTGAGCTGTATGCTGTTTACTGTGCACCAGATGGAAAGATTTTTGATTCTGTGTTTGAAGTAGCATGTTACCTGGGGTTAATGCCTGGCTACAACTCTGTGGAATCTGAAATGAGAAATGACAGGCATGTCTCTTCATTAGGTGGGTCTCATTTTACCAGAAAAAGAAAGTCAACTAGAGTTTCAGTCGCTAATGGCTTTGCCGACAGAAAGGAAAGCTTAACCAATAGTTGTTTTAGAGATCCTCCTTCAGATGCTGCAAGTGCAGAGTGTGCTAATGCGTGTGGGAACATATCAGAAGCCACATTGAGTGGAAGGAAAGAGGACAATCAATCTGGCCCTCAGCAATCTGCCGATGGCCTTCCTTTACAGTTTGAAGATTTTTTTGTTCTTTCTTTGGGGAAGGTTGATGATAGACCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTATAAATCTTGCTGGCATGATAAAATTACTGGCTCCATTTTTACATGTGAAGTTCTGAATGGTGGTGATTCTGGACCGAGATTTAGGGTCAGAAGGTGTTCCTGTTCTGATTTTACAATTCCAGTAGGGTCAACCATTCTCTCAACGTCTAACCTTTGTCAATTTGTGAGTCAAACCGATGAAGGTGAGGGAAAGATGAATGATAATATGGAATGTGATGAGGATGAAAGTATCCAGATGATTCTAGATGACCCTTGCAATCCTACAGAAAATGATGTTTTGAGTTGTCTTGAAAGTTGCTCTAGTGAAGCACATGATAATCATATGTTAGATGTATTGCAGTCTGCAGTTGGTCCAGTTCAAGATGAAACTCATAATTTGTCTGATGACTCGGGGTCAGTTGGTGAGATTGTGGTGGAAGAGTGTTCGTCATCCTCAGCATGGAAGGAGATTTCCCAAAAATTAGTTGATGCTTGCAGTGAGATATGCAAGCAGAAAGGGACTCTAAAGCTTTATTGCAAACACTCTCAAAATGAAATATGCGTACATAAATGGAATATAAGGAATGACAAAAATGAAACACACTGCACTTCATTTGCTAAATTTTGTGGGTCCTCCGCACTTGGTATCCCCTCCATGTTACATGCAGATAATGATCTTGAAAGTTTGTATGAGGTCTTGAGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTTGAGTTTGTCCAAGAAGTACTCGAATTGCTTCCTGGTGTTGAAGGATTTCCACGGTATGAATTTCTGAATACTAGAAGTAATAGCTCGTCTATGCTAACAGTTGGAAATGGGTTCTTAGTAGCTGATTGGAGAGGCAGATCCCAATATGAGGAAGAAGCAGTTCATGGTTTATATAGGAGACACAAGAAAGTCAAATTGGCCGAAGAATGTGTTAAGGAAGATCATTATCCACCTCCTGGGAAGCCACTATCCTCTAGAGTTCCTTATGAACTCGTTGGTGATGTTTTTCAGGCTTGGGAGCTATTACGCAGATTTCATGAAATTTTGGGCCTGAAGGAACCTTTGTCATTGGATGAGCTGGAGAAGGAACTCATCAACCCATGGTTTAATGGATCAGTCTTTAGTGAAAAACTTGAGGGTGATGGCAGTGGTGGAGCAATATTATCCCCAAACGGTGAAGCTGCTCCAGTTTCTGCTGAAAGTCCCCATGCATTTATTCAAGTGGAAACTGAAGCCATGAAAGAGGCAGCTCAAGTTAAGCTTGCATCGTTCACTTACACCAGATGCTTTGGTGCATCTTTGACGAAGGCTCATAATTCCTTGCTGGAGGTTTTGATAGGTGAACTGCAGTCTAAAGTGGCTGCCCTGGTAGATCCAAATTTTGATCCTGGAGAGCTGAGGACCAGAAGGGGAAGAAGAAAAGACATAGACAGTTCTGTTCCTGCCAGACGAGCCAAGCTCAATATGCTTCCTATTAATGAACTAAGTTGGCCTGAATTGGCTCGTAGATACATATTAGCTGTCTTGTCAATGGATGGCAATGTTGACTCACCAGAGATTACTGCTCGGGAAGGTGGCAAAGTATTTCGCTGCTTACAAGGTGACGGTGGTTTGCTGTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCATTGTTGCTTGCGGAGGCTTCAAAGAAAATTTTTGGTTCTGTGAGCAGTGAAAGTGATGTGCTTACCTTTGAAGATGAGGAGTTAGACACAAAGGATGCTTGTGAGAAAACTTCGGTGAATGGTGGTATTATTCCAGAATGGGCTCAGCTGCTAGAACCTGTGAAAAAACTACCAACAAATGTGGGAACCAGAATCAGGAAGTGTGTCTATGATGCCTTACTTAAGGATCCACCAGAGTGGGCTAAGAAGATACTGGAACACTCAATTAGTAAGGAAGTGTACAAGGGCAATGCTTCTGGACCTACAAAGAAAGCAGTTCTTTCTGTGTTGGCTAATGTGTCTGGTGAAGGATCGCAACAGAAGCCCAATAAAGCAAGGAAGAAAAAGACTGTAATATCTATCTCTGACATTATCATGAAACAATGTCGCATAGTATTACGCCGTGCTGCTGCTGCTGATGATTCGAAGGTTTTTTGCAATTTGCTGGGACGAAAATTGATAAATTCTTCTGACAATGATGATGAAGGGCTTCTGGGATCACCAGCCATGGTGTCTCGTCCTCTTGACTTTAGGACCATTGACCTACGACTGGCTGCTGGGGCTTATGGTGGATCTCATGAGGCTTTTCTTGAGGATGTTCAGGAGCTATGGAACAATGTTCGTATTGCTTTTGGGGATCAACCTGATCTAGTTGGGCTGGCTGATAAATTATCTGAGAATTTTGAATCGTTGTATGATAGCGAGGTTTTAACTAACGTGCAAAGGTTTAAAGAGTATGCCAAATTGGGAAACTTGAGTGTGGAAATGAGAAAAGAAGTGGAAAAATTTCTTGCATCAATTAGTGAAATTCCAAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTTTGTGGCATTGATAGGGATGATGACAGTGTTTTGCTATGTGACACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGACAGTAAACATGCTGTTCAAGATGTTTCACAATGTTCAAAACTTATTGTCAAACCTAGAAGTAAAAAATTCAAGGGGGAGGTTTCTTCGCTTTACTTGGAGGCTCTAACTCATCTACTATCTGTTATGGAAGAGAAAGAATACTGGGAGTACAATGTGAACGAGAGAACCATCCTTCTCAAGTTTTTATGTGATGAGTTCCTCAACACTTCCCTCATTCGCCAGCACCTTGAGCAATGTGCTGAGTCATCTGCTGAATCACATCAAAAGTTGCGTGCCCTTGCTGCAGAGTGGAAAAGCCTTAAAATTAAAGAAGAAATATTATCCAGTAAAGCTGCAAAAATTGACACATGCTGTATGTCAACTACAGGAGAAGTTGTCCTCAAGGAGGGGCTTCCTGGATCTCTTTCAAATTCTGGTAAGTGCTTGGTTCAGCCACATAGTGCAAGTGACAGTCCTAACAATTTTGGGGTATTTGCTGATAGTTTGCACTCAGAAGAGATAAATAAAGAGAAAAATGGGTTTAACAATGTCAATGTTGATAAAAGTGTCTCCACAACTAATTCAGAGACAGATAGTCAAAGCAGGAATCCCATAAATTTGGAGGTACAGTTGAAGAATGTCTTTGCAGTTGTGGATGACGGTCAGTTGCCTACAAATATGACTTCCTGTGTGGATTCTCAATGTAGCGACAAGTCTAGTAATCCTTTTTCAATGGCAAATAATATGCCTCAAGAAATTAACAGCTCTGGTGAAGCAATTCACAAGCAGGGTAAGCGGCAGAAATGTGAGGGAAGAGATGCATCTCTTGATCTGCAAGAACAAGGTGTCCCTTCTGATGTTCCTAAATCTGCTGTAAATGAATCAGAACAATATCACCTTGAGCTCAATGCGATCAGACATGATATCTCACTTCTTCAAGAGTCAATAACTAGTGTTGGATCGCTGCTTCTAAAGCTTTCTATTCGTCGGGAATTTTTGGGAATCGATTCACTTGGTCGCTTTTACTGGGCTTCAGTAATGCCTGGTGGAATTCCATGTATACTTGCTGATTCAACTGCTTTGATGTTGCATGGGGAAAGAATGAATAATGGCAAAGACCCTGTGGACAGGATTTCTACTATGAAGAATTGTGCTCTATCGGGCAAGGATACCTATCAGATGTTAGGGCTGATGAAAGATTTATCTCCTATAATGTCTCTACCAACTAATACTGTAGGCTGTAATTCACCATGGGTTGCGTATCAAACTGATGCTGAAATTGAAGAGCTCTTATGTTGGATGAAGGATATTGACCCTAGAGAAAGAGAACTTAAAGATTCAATTATGGTTTGGCAAAAGTCAAGATTCCAAGAACTTATTCATATGCAGAATGAAGATCAGGTTGAGCCCCAAGGACCTTTTCCTTTGCCAGGGGATCGAGAGAAAATAGTGTCTGATTCTCTTGTTACAAAGGCAACCTCCTTGTTAGAGAAGAAATATGGCCCATTCTTAGAGTCGGGTACCCTTGAGGTGCTGAAGAAGCGGGGTAAAAAGGTAAGGACATCCAATGATGAGAAGTTGTATAGGTGCCAATGCCTAGAACCCATATGGCCTTCCAGGAAACACTGCATGTCTTGTCACAAAACCCTTTTGAATGATGTTGAGGTGGAGGGACACAATGATGGCAAATGTAGTGCTACTTTGCCTACCTCGGAGAAGAATAAAGATATCAGTGGATCTTCCAAAGGGAGAGGTAATTTGAAATTTGAGACCACCCATGAAAAAGTCAGAGGTGATGCAGAAACAAGTGGAGGTTCCGAGCTTAGCTCAAGATTGATCAAGTTTTCGAATCAAGACTCAACATGTCCTTATAACTTCGAAGATGTCTGTTCCAAGTTTGTGACTGAAGATTCCAACAAGGAACTTATTAAAGAAATAGGTCTAATTGATTCAGATGGGATCCCATCCTTTGTTCCTTCTGTATCTCCTTATGTAAGTGATTCTACAGTTATGCTAATATCATATAAAAAGGATGAATGTGTTCCTGGTGGGACTAAGGCTTCTGAAGAGCAGACTCTTAAAGGAAATGAGGGAAATGGCATGTGCCATGACCATATGTCAGGAATTCCTATTCAAAGTTCCAATGTGTATGAGCACAATAAAGCAGGGAAATCCAGTAGATCAACTTTGGGATCTGCGGGACAAAGGGGTGGAAAACCTTTATTCTCTGTTCCTGCTTCACAAATGGGCAGTGACAGTTGCTGTGTGGTGCCACAATCTTCATTGAGACCATTGGTTGGAAAAGTTTCACATATTTTGAGGTTACTGAAAATTGGCTTACTTGATATGGATGCTGCACTCCCTGAAGTTGCTTTGAGATCATCAAAAGCACAATTGGAAAGAAGACAGGCTTGGCGTTCATTTGTCAAATCTGCAAGGACTATATATGAGATGGTTCAGGCAACTATCACACTGGAGGACATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTACTGGTCATCACTCTCAGCTGCTGCCAAATCTTCTACTTTGTCATCCCTTGCCCTTCGAATATACACCCTTGATTCAGCCATTATATATGAGAAAGTGTCAAGTTCAAGTTCTACTGATTGCTCAGAACCTTCTGTGGTAGCAGAACAGAGAGACTTAGCCTCTTTGGATGCAGAGAAATCCAAAGCAATACGGAAGTCAAGCAGGAAAAGGAAGGAACCAGATGGTTAA 6690 0.4274 MELTDSGDELSHSHHKLSQDSRSGLGIDLNEIPSPSFTETLPDSIDIVRAYHENPPPPPGGPAGIPGDARGSVCGSCGKPEARGHVVVCDGCEKGYHLGCAGMRGRQAVNLDEWVCGECVSSGVKSKRWPLGVKSKHLLDINASPPSDADGEGSEELQDLRKHTQGHNSFSANSFGASLTYSNFVNGNAIGLQKASGVVTHAVRVGFEDVLNHTQSVTRIFGEVDMGLPPGKHRNSKTTASGNPGELILQALREFISERRGVLEEGWKVEFRQPTGGSELYAVYCAPDGKIFDSVFEVACYLGLMPGYNSVESEMRNDRHVSSLGGSHFTRKRKSTRVSVANGFADRKESLTNSCFRDPPSDAASAECANACGNISEATLSGRKEDNQSGPQQSADGLPLQFEDFFVLSLGKVDDRPSYCDANIIWPVGYKSCWHDKITGSIFTCEVLNGGDSGPRFRVRRCSCSDFTIPVGSTILSTSNLCQFVSQTDEGEGKMNDNMECDEDESIQMILDDPCNPTENDVLSCLESCSSEAHDNHMLDVLQSAVGPVQDETHNLSDDSGSVGEIVVEECSSSSAWKEISQKLVDACSEICKQKGTLKLYCKHSQNEICVHKWNIRNDKNETHCTSFAKFCGSSALGIPSMLHADNDLESLYEVLRKWLEQDRFGLDVEFVQEVLELLPGVEGFPRYEFLNTRSNSSSMLTVGNGFLVADWRGRSQYEEEAVHGLYRRHKKVKLAEECVKEDHYPPPGKPLSSRVPYELVGDVFQAWELLRRFHEILGLKEPLSLDELEKELINPWFNGSVFSEKLEGDGSGGAILSPNGEAAPVSAESPHAFIQVETEAMKEAAQVKLASFTYTRCFGASLTKAHNSLLEVLIGELQSKVAALVDPNFDPGELRTRRGRRKDIDSSVPARRAKLNMLPINELSWPELARRYILAVLSMDGNVDSPEITAREGGKVFRCLQGDGGLLCGSLTGVAGMEADALLLAEASKKIFGSVSSESDVLTFEDEELDTKDACEKTSVNGGIIPEWAQLLEPVKKLPTNVGTRIRKCVYDALLKDPPEWAKKILEHSISKEVYKGNASGPTKKAVLSVLANVSGEGSQQKPNKARKKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVQELWNNVRIAFGDQPDLVGLADKLSENFESLYDSEVLTNVQRFKEYAKLGNLSVEMRKEVEKFLASISEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDSKHAVQDVSQCSKLIVKPRSKKFKGEVSSLYLEALTHLLSVMEEKEYWEYNVNERTILLKFLCDEFLNTSLIRQHLEQCAESSAESHQKLRALAAEWKSLKIKEEILSSKAAKIDTCCMSTTGEVVLKEGLPGSLSNSGKCLVQPHSASDSPNNFGVFADSLHSEEINKEKNGFNNVNVDKSVSTTNSETDSQSRNPINLEVQLKNVFAVVDDGQLPTNMTSCVDSQCSDKSSNPFSMANNMPQEINSSGEAIHKQGKRQKCEGRDASLDLQEQGVPSDVPKSAVNESEQYHLELNAIRHDISLLQESITSVGSLLLKLSIRREFLGIDSLGRFYWASVMPGGIPCILADSTALMLHGERMNNGKDPVDRISTMKNCALSGKDTYQMLGLMKDLSPIMSLPTNTVGCNSPWVAYQTDAEIEELLCWMKDIDPRERELKDSIMVWQKSRFQELIHMQNEDQVEPQGPFPLPGDREKIVSDSLVTKATSLLEKKYGPFLESGTLEVLKKRGKKVRTSNDEKLYRCQCLEPIWPSRKHCMSCHKTLLNDVEVEGHNDGKCSATLPTSEKNKDISGSSKGRGNLKFETTHEKVRGDAETSGGSELSSRLIKFSNQDSTCPYNFEDVCSKFVTEDSNKELIKEIGLIDSDGIPSFVPSVSPYVSDSTVMLISYKKDECVPGGTKASEEQTLKGNEGNGMCHDHMSGIPIQSSNVYEHNKAGKSSRSTLGSAGQRGGKPLFSVPASQMGSDSCCVVPQSSLRPLVGKVSHILRLLKIGLLDMDAALPEVALRSSKAQLERRQAWRSFVKSARTIYEMVQATITLEDMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYTLDSAIIYEKVSSSSSTDCSEPSVVAEQRDLASLDAEKSKAIRKSSRKRKEPDG 2229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 2188 2229 - -
Mibi06g1481 2229 Pfam Methyl-CpG binding domain 254 306 IPR001739 GO:0003677
Mibi06g1481 2229 SUPERFAMILY Bromodomain 1109 1228 IPR036427 GO:0005515
Mibi06g1481 2229 CDD PHD_SF 73 119 - -
Mibi06g1481 2229 Gene3D - 1101 1227 IPR036427 GO:0005515
Mibi06g1481 2229 SUPERFAMILY DNA-binding domain 257 309 IPR016177 GO:0003677
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 1878 1921 - -
Mibi06g1481 2229 ProSiteProfiles Bromodomain profile. 1165 1213 IPR001487 GO:0005515
Mibi06g1481 2229 ProSiteProfiles Zinc finger PHD-type profile. 71 122 IPR019787 -
Mibi06g1481 2229 ProSitePatterns Zinc finger PHD-type signature. 1275 1319 IPR019786 -
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 1 38 - -
Mibi06g1481 2229 Gene3D - 398 505 - -
Mibi06g1481 2229 SMART PHD_3 73 120 IPR001965 -
Mibi06g1481 2229 SMART PHD_3 1274 1320 IPR001965 -
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 1496 1515 - -
Mibi06g1481 2229 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1354 1398 IPR028942 -
Mibi06g1481 2229 CDD PHD1_Lid2p_like 1274 1319 - -
Mibi06g1481 2229 Pfam PHD-finger 74 121 IPR019787 -
Mibi06g1481 2229 Pfam PHD-finger 1274 1320 IPR019787 -
Mibi06g1481 2229 ProSiteProfiles FYR domain FYRN motif profile. 397 450 IPR003888 GO:0005634
Mibi06g1481 2229 ProSiteProfiles Zinc finger PHD-type profile. 1272 1322 IPR019787 -
Mibi06g1481 2229 ProSitePatterns Zinc finger PHD-type signature. 74 119 IPR019786 -
Mibi06g1481 2229 SUPERFAMILY FYVE/PHD zinc finger 1260 1325 IPR011011 -
Mibi06g1481 2229 SUPERFAMILY FYVE/PHD zinc finger 71 131 IPR011011 -
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 1 21 - -
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 2206 2229 - -
Mibi06g1481 2229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1228 1333 IPR013083 -
Mibi06g1481 2229 PANTHER OS02G0192300 PROTEIN 11 2225 - -
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 1901 1915 - -
Mibi06g1481 2229 CDD Bromodomain 1120 1227 - -
Mibi06g1481 2229 MobiDBLite consensus disorder prediction 1878 1900 - -
Mibi06g1481 2229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 139 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1481 1 2229 C2H2 Transcription Factor Family AT3G01460 45.495 0.0 1794
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mibi06g1481 MBD 7.5e-11 CL0081