Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi06g1480 | ATGATAGAATCGAGACGAGCAGGTAGAGGCACAAGTACAACGATGGAGAGTGAAACCGCCAGGGAAGCAAGAAGCATGTCAAAAGATGAAATAGAGAAGCTTCCTTGTTTTGATTATGTAGCCAAAGACAATGAAACTAGTGCTGTAGAATGTGCAGTGTGTTTGGAGAATCTGGTAACAGGGGAAAAGTGCAGGTTATTGCCTACATGCAAGCACAGTTTTCATGCTCACTGTTTGGATCAATGGCTTCCTCATACACCTGTTTGCCCTGTTTGTAGGGTCAGCTGTGTTGGCTCTCAGAAGGAATGCTTTATGATTGATATAAATCACAGTAGCCCTTTTGAGCCAGACAATAGACGGTTGAGAGAAAACCCATAA | 378 | 0.4312 | MIESRRAGRGTSTTMESETAREARSMSKDEIEKLPCFDYVAKDNETSAVECAVCLENLVTGEKCRLLPTCKHSFHAHCLDQWLPHTPVCPVCRVSCVGSQKECFMIDINHSSPFEPDNRRLRENP | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi06g1480 | 125 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE | 20 | 97 | - | - | |
| Mibi06g1480 | 125 | Pfam | Ring finger domain | 50 | 93 | IPR001841 | - | |
| Mibi06g1480 | 125 | SMART | ring_2 | 51 | 92 | IPR001841 | - | |
| Mibi06g1480 | 125 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 11 | 97 | IPR013083 | - | |
| Mibi06g1480 | 125 | ProSiteProfiles | Zinc finger RING-type profile. | 51 | 93 | IPR001841 | - | |
| Mibi06g1480 | 125 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
| Mibi06g1480 | 125 | SUPERFAMILY | RING/U-box | 31 | 97 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi06g1480 | Mibi-ChrMibi06 | 35211018 | 35211395 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi06g1480 | 22 | 93 | C3H Transcription Factor Family | AT1G74410 | 41.667 | 3.16e-17 | 72.8 |