LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi06g1477	ATGGACCTGGAATCTGTAGTATATCAAAATCCGATCAAGAAAGAATCATGGAAGACAGTGCTGACTTTGGCTTATCAGAGCTTGGGAGTTGTCTATGGAGATTTGAGCACTTCCCCTCTTTACGTCTACAAAAGCACTTTTGATGAAGACATACAACATTCAGATACAAATGAAGAAATATATGGGGTTCTGTCTTTTGTGTTTTGGACACTCACTCTGATTCCACTAGTCAAGTATGTCTTCATTGTGCTTCGAGCTGATGACAATGGCGAAGGAGGCACTTTTGCTTTATATTCTTTGTTATGCCGACACGTTCGAGTTAGCTTATTGCCTAATACACAGCGAGCCGATGAAGACTTAACGGAATATACCAAAGACGATGGGACTGTACCGATTATAAAGAAGAATGTTGGGTGGGGCTTGAAATCTGTTTTGGAAAAACATAGGGTGCTTCAGAGGGTGTTGCTGATTCTTACTTTGATAGGGACTTGCATGGTTATTGGTGATGGCGTGCTCACACCAGCGATTTCTGTTTTTTCTGCTGTGTCTGGCCTTGAGCTTTCCATGTCTAAAGAGCATCATCAATATGTTGAGGTGCCAGTGGCATGTATAATTCTGGTACTTTTGTTTGCACTCCAACATTATGGGACCCACAGATTGGGGTTTCTGTTTGCTCCTGTTGTGCTGACGTGGCTGTTATGCATTAGTGCCATTGGTGTCTATAATATCTTCCATTGGAACCCACATGTTTATGAAGCTCTTTGCCCATACTACATGTTCAAGTTCCTTAGAAAGACCCAGAGGGGAGGTTGGATGTCATTAGGTGGCATTCTTTTATGCATAACAGGTTCTGAAGCTATGTTTGCAGATCTAGGACACTTTTCACAGCTGTCAATTAAGATTGCTTTCACCTTTTTAGTGTATCCTTCTTTGATATTGGCATATATGGGACAAGCTGCGTATCTTTCCAAGCATCATATCTTGGAGAGTGACTACCGAATTGGGTTCTATGTATCTGTTCCTGAGAAGATTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTTGTTGGAAGCCAAGCTGTGATCACAGGAACTTTCTCAATAATCAAACAGTGTTCTGCTTTGGGCTGCTTTCCCAAAGTCAAAATCATTCACACATCATCTAAAACACACGGCCAGATTTACATCCCAGAAATCAACTGGACCTTGATGCTTCTTTGCCTCGCCATCACGGTCGGCTTTCGAGACACCAAACGCATGGGAAATGCATCAGGCTTGGCTGTCATAACTGTGATGCTGGTAACTACTTGCCTGATGTCTCTAGTTATAATATTGTGCTGGCGCAAAAGCATTTTGCTAGCCATGTGCTTCATATTCATCTTTGGCTCAATTGAAGCACTTTACTTCTCTGCTTCCCTAATCAAGTTCCTTGAAGGGGCATGGGTCCCCATAGCTCTCTCATTCATCTTCCTCCTAATCATGTGTGTATGGCATTACGGCACACTGAAGAAGTATGAGTTTGATCTTCAAAACAAGGTCTCCATCAACTGGCTTCTCAGTTTAGGCCCTACCCTTGGCATTGTAAGAGTCAGAGGAATTGGTCTCATACACACAGAGCTAGTATCAGGAATTCCAGCCATATTCTCTCAGTTTGTCACCAATCTTCCAGCTTTTCATGAGGTTGTCATCTTCCTCTGCGTAAAATCTGTGCCCGTGCCTCATGTCAGACCAGAAGAGAGGTTCTTGGTGGGGAGGGTTGGGCCAAGAGAGTATCAACTTTATCGGTGCATAGCGCGATATGGTTACCGGGATTTCCACAAGGATGACACTGAGTTTGAGAATGATCTTGTTTGCAGCATAGCAGAATTTATCAGATCATCAGATAGTTTTGGGAATATTTCAGTTTTTGACAACTTTGAAGTTGATGATGCAAAAATGACAGTTGTTGGGACTTCAGCTGCAAAACTGGAAGGTGTAAGAATGTGTGAAGAAAACAAAAATAGAGCTTGTTCAGAAATGGAAGGAACTTCAGAGTTGAGGGAGGAGAATTATCCTGAAAAGGTTAAGAAGAGAGTGAGATTTGTTGTACCAGAAAGTCCACAGATAAACTTGGAAGCAAGGGAGGATTTACAGAAGTTAATGGAAGCAAGGGAGGCAGGAATGGTTTTTATAATGGGTCACTCGTATGTGAAAGCAAAAAGTGGATCAAGCTGGATAAAGAAAGTTGTCGTCAATTATGGGTTTGAATTTCTGAGGAGAAACTCTAGAGGACCAACTTATGCTTTGAACATACCTCAAGCATCTACATTAGAGGTTGGAATGATCTATCGCGTGTAA	2343	0.4213	MDLESVVYQNPIKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFDEDIQHSDTNEEIYGVLSFVFWTLTLIPLVKYVFIVLRADDNGEGGTFALYSLLCRHVRVSLLPNTQRADEDLTEYTKDDGTVPIIKKNVGWGLKSVLEKHRVLQRVLLILTLIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHQYVEVPVACIILVLLFALQHYGTHRLGFLFAPVVLTWLLCISAIGVYNIFHWNPHVYEALCPYYMFKFLRKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHILESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKTHGQIYIPEINWTLMLLCLAITVGFRDTKRMGNASGLAVITVMLVTTCLMSLVIILCWRKSILLAMCFIFIFGSIEALYFSASLIKFLEGAWVPIALSFIFLLIMCVWHYGTLKKYEFDLQNKVSINWLLSLGPTLGIVRVRGIGLIHTELVSGIPAIFSQFVTNLPAFHEVVIFLCVKSVPVPHVRPEERFLVGRVGPREYQLYRCIARYGYRDFHKDDTEFENDLVCSIAEFIRSSDSFGNISVFDNFEVDDAKMTVVGTSAAKLEGVRMCEENKNRACSEMEGTSELREENYPEKVKKRVRFVVPESPQINLEAREDLQKLMEAREAGMVFIMGHSYVKAKSGSSWIKKVVVNYGFEFLRRNSRGPTYALNIPQASTLEVGMIYRV	780

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi06g1477	780	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	13	778	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi06g1477	780	Pfam	K+ potassium transporter	25	606	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Mibi06g1477	780	TIGRFAM	kup: potassium uptake protein	23	780	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi06g1477	Mibi-ChrMibi06	35163414	35167004	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi06g1477	1	780	Inorganic Solute Cotransporters	AT5G14880	76.726	0.0	1234