Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1475 ATGGAACAATTGTTCATGTGGATCATTTTTATGTCATTCCTTCTCCTCCCGAACTCTGGCAATTGTGTGGAGAACGAGGTCAGCAGCACATTGATAAACTTTCTTGCAAAACTCTCTAACAACAATGGCCGCCAAAAATCTAATTTGGTGTGGAAGCCAGGCTCTGATCCTTGCAGGGACTTGTGGCAAGGTGTGGTGTGTGATGATAAAAATGCATCAGTACAGAAGCTATTTCTTAACAGCTCCAATTTAGCTGGAACTCTTGATGTTGCTATGCTTTGCAACTTGCAGCCCCTGGCGGCGTCTCTAACTTCTCTTAACCTCGACAGTAACAACATAATTGGAAAAATAGCAAATGAGGTTGGAAACTGCAAGCATCTCACTCACTTGAATGTAAGTGGTAACCAACTTTCTGGAATACTTCCTAGCTCACTTGCCATGTTGAGTAACTTAAAAGAACTTGACATATCCAACAATAGTTTCTCCGGGAACTTGCCAAATATGTCCACAATCTCCGAACTAGGTGCATTTTTCGCTCAGGATAATCAGCTCACGGGGGTAATACCCCCTTATGACTTTACCAGATTTGACCACTTCAATGTATCCTTCAACCATTTAAGTGGCAGTATTCCAGATTTGCAAAACCATTTCTCTGCGGATAGTTTCTTGGGAAATCCTGAGCTTTGTGGATTCCCTTTGCCAAAAAACTGTTCATCTATCCCTATATCTGATGCCGAACCATCTGATTCAGAAGAATCAAAGGGTCCTTCTACAAGCCAGATTCTTATGTATTCAGGCTATTTTATACTGTGTTTGGTCTTCATCCTTTCTGTAGTTCTTGCACTGTGTAAAAGAAACAGGACAGGAAACAAGGTTGAAGCAGAAAATGAGGCAGGCGATGACAGTACCAATGACAAGCTTAGCTACGTTTCAAATGAGTACAAATCAAGCGTGAACAAACCAGAGATTTCAGACACTACGGAAAGTGGGATGGTTTCACAATCACTTGTAGTTTTCTCAAGGTCAACTGTAAATGATATTACAATGAAGGACTTGATGAGGTCCCCTGCCGAACTCATTTGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTGATACTGGACAATGGGATGATGGTGGTTGTTAAGAGGATTAATGACTTCACTATATCAAGGCATGACTTCAAACAAAGGATGCAAATTGTGAGCCAAGTGAAGCACCATTCTGTACTCTCACCTCTTGCTTTCTATTGTTCCAAACAAGAGAAACTTTTGGTATATGAATATCTGGAGAATGGAAGTTTGTTCAAGCTTCTACATGGCTCCTCAAAAGACTTTGATTGGACCAGTAGACTTGGGATTGCAGCCAGAGTTGCAGAGGCATTAGCTTTCATGCATCAAGAGCTCGAAGAATGCGGGATCAGGATCGCGCATGGTAACTTGAAATCCTCCAACATTCTGCTAAACAAGAATATGGAGGCCTACATAAGCGAGTATGGCATTATGGTTATGGATGATCAACAACTTAAAATTCAGCAACATAGTTCATCTTTTGCCAGTTCTTATGCTTCTGGTGGATCAGATGTCTTCAAGGGAGATGTTTATGGCTTTGGAGTGATTCTTCTGGAGCTACTTACTGGGAAGTTGGTGAAGTGCAATGGGATGGACTTGACTGAGTGGGTTGAGTCTGTTGTAAGGGAAGAATGGACGGTTGAAGTGTTTGACAGGTCTCTTATATTAGAGTATGCAAGTGAAGAGAGGATGGTGAACTTGCTTCAAGTTGCTATAAAATGTATTAACCATTCCCCAGAGGCTAGGCCAAGTATGAACCAAGTTTCTCTCATGATCAACGTCATAAAAGAGGAAGAAGAGAAATCCTTGATTTATGAAGCGCAAGGCTAG 1899 0.4144 MEQLFMWIIFMSFLLLPNSGNCVENEVSSTLINFLAKLSNNNGRQKSNLVWKPGSDPCRDLWQGVVCDDKNASVQKLFLNSSNLAGTLDVAMLCNLQPLAASLTSLNLDSNNIIGKIANEVGNCKHLTHLNVSGNQLSGILPSSLAMLSNLKELDISNNSFSGNLPNMSTISELGAFFAQDNQLTGVIPPYDFTRFDHFNVSFNHLSGSIPDLQNHFSADSFLGNPELCGFPLPKNCSSIPISDAEPSDSEESKGPSTSQILMYSGYFILCLVFILSVVLALCKRNRTGNKVEAENEAGDDSTNDKLSYVSNEYKSSVNKPEISDTTESGMVSQSLVVFSRSTVNDITMKDLMRSPAELICRGKFGSLYKVILDNGMMVVVKRINDFTISRHDFKQRMQIVSQVKHHSVLSPLAFYCSKQEKLLVYEYLENGSLFKLLHGSSKDFDWTSRLGIAARVAEALAFMHQELEECGIRIAHGNLKSSNILLNKNMEAYISEYGIMVMDDQQLKIQQHSSSFASSYASGGSDVFKGDVYGFGVILLELLTGKLVKCNGMDLTEWVESVVREEWTVEVFDRSLILEYASEERMVNLLQVAIKCINHSPEARPSMNQVSLMINVIKEEEEKSLIYEAQG 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1475 632 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Mibi06g1475 632 Gene3D Transferase(Phosphotransferase) domain 1 429 631 - -
Mibi06g1475 632 SUPERFAMILY L domain-like 51 232 - -
Mibi06g1475 632 Gene3D Phosphorylase Kinase; domain 1 314 428 - -
Mibi06g1475 632 Pfam Protein tyrosine and serine/threonine kinase 359 612 IPR001245 GO:0004672|GO:0006468
Mibi06g1475 632 SUPERFAMILY Protein kinase-like (PK-like) 357 614 IPR011009 -
Mibi06g1475 632 FunFam Leucine-rich repeat receptor protein kinase EMS1 95 191 - -
Mibi06g1475 632 Gene3D Ribonuclease Inhibitor 21 99 IPR032675 -
Mibi06g1475 632 Gene3D Ribonuclease Inhibitor 100 241 IPR032675 -
Mibi06g1475 632 PANTHER OS05G0588300 PROTEIN 6 620 - -
Mibi06g1475 632 ProSiteProfiles Protein kinase domain profile. 354 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1475 Mibi-ChrMibi06 35122360 35124359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1475 62 619 Receptor kinase-like Gene Family AT3G08680 34.014 1.17e-92 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi06g1475 PK_Tyr_Ser-Thr 2.7e-24 CL0016