Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1459 ATGAGTTGTTATTGGATAGAAATAGAGAGATCTCATTGGAGAGAAATGTCAAGAGACACAAGATTGCATGGGGAAATTATGACATCTAACGCAACAGAATCATCGGCAAGTCATCTACCAACCGAAGAACCTGAAACTATCCAAACAAGCATAGATTGGCAGAAAAAAGATTCAAAGAAGATCAAGGCCAAAAAAGAAAGCCATAAAACAGTTCCATTCTACAAACTTTTTTCATATGCAGATACTTTTGATCGTCTTCTCATGTTTGTTGGGACAACAGCAGCTATTGCTAATGGAATGACTATACCTCTATTGATGATAATTTTTGGAAATGTCATTGATGCGTTTGGAGGAGCTAATGACTCCAAAGAAATGGTTCATAATGTCTCCAAGGCGTCTCTTGACTTCGTATACTTGGCTATGGGTACCTTTGTATTTTCCTTTTTGCAGGTGACTTGCTGGATGGTCACTGGAGAGAGACAGTCTGCAAGGATAAGAAGCTTATACCTTGAGGCCATTTTGAGACAAGAAGTAAGCTTCTTTGATAGGGAAACCAATAGTGGAGAGGTTATTACAAGGATGTCAGGTGACACAGTTCTCATTCAAGATGCCATGGGAGAGAAAGTAGGAAAGCTCATACAGCACGTGGCAACATTTGTAGGAGGTGTGGTCATATCATTTTCCAAGGGCTGGCTATTCACCCTTGTCCTGCTATCTTATCTTCCACTTTTTCTCCTCTCTGGTGCCTTGATGAGCTTAGTCGCTGCAAAAATGGCATCTCGCGGACAAGCAGCCTATTGCACAGCAGCAAATGTGGTGGAACAGACAATCAGTTCTATTCGAACTGTTGCATCTTTCACCGGGGAGAAGCATGCTATAAGCCAATATGATAAATCTTTAATAAAAGCTTACCGTGCTGGTGTGGTGGAGGGAGCAGCTTCAGGTTGCGGCTTTGGTTCAGCTCGTATGTTTATATTCTCCAGTTATGCTTTGGCCGCATGGTATGGAGGGAAGATGGTACTAGAGAAAGGATATACAGCAGGGCAAGTCATGAGTATCTTTTTCACAATATCTACTTGCTCCTTGTCTCTAGGGCAGTCATCTCCAAATTTGATTTCATTTGCTGGGGGACAAGCTGCAGCTTTCAAAATGTTTGAAACAATAAAGAGGAAACCAGAAATTGATGCTTATGACACTTCTGGTAAGAAGTTGGATGACCTTAATGGAGATATAGAACTGAAGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAGCTAATATTCAATGAATTTTCTATATCAATACCAAGTGGCACTACTACTGCCTTGGTAGGGCAAAGTGGGAGCGGGAAATCAACTGTCATCAGTTTGATAGAAAGGTTTTATGATCCACAATCTGGTGAAGTTCTCATTGACAATATCAATCTCAGAGAGTTCAACTTAAAATGGATTAGAGGGAAAATAGGCCTTGTCAGCCAAGAACCAATTCTCTTTTCTTGTAACATTAAAGAGAATATTGCTTATGGCAGAGATGGCGCAACCGACGAAGAAATCAGAGCTGCAGCAGAACTTGCTAATGCTACTAAATTTATTGATAAATTTCCTCAGGGACTAGACACAATGGTAGGCGAGCATGGAACTCAGCTCTCTGGGGGCCAAAAGCAGAGAATTGCAATAGCAAGAGCAATCTTGAAAGACCCAAAAATTTTACTTCTTGATGAAGCTACCAGTGCCTTGGATGCTGAATCTGAGAGAGGAGTGCAGGAGGCATTGGACAGAATTATGATAAGCAGGACCACGGTAATTGTAGCACACCGTTTAACTACTATAAGAAATGCAGATATAATAGCTGTTATTCATCAAGGAAAGATAGTGGAAAAAGGCTCGCATGCAGAGCTCACAGAGGATCCAAATGGATCCTATAGCCAGCTCATTAGATTGCAAGAAACTAAAAGGGAACAAGAACTAAGTAGTGCAAATTACCAGGATAAGCCTGAAAGCTTTCAGGACTCTGAAAGACAGTCAAGTCAACGATTTTCCTTCCTTCGGTCAACAAGCCAAGGATCATCTGGAAAAGGAAATAGCAGCCGTCACTCTTTCTCAAGTCTCACTTCTGCAGCAGCAGGAGATTCTGATGCAGCATCACATATCCCTGCCAAAGTCTCACTTCTCCGCCTTGCTCATCTTAACAAGCCTGAATTCCCAGTGTTACTCTTGGGTACTTTGGCTGCAGCACTAAATGGAGCAGTATTACCTATTTTGGGCCTCCTTCTATCTGGAATGATTCATACTTTATTTGAGCCTGCAGATAAACTCCGTAAGGACTCAAAATTCTGGGCATATGTGTTTGTTGCACTTGCTGTGGCAGCCTTCTTAGTGAATTCCATACGGTCCTACTTTCTTGGTGTGGCTGGTTGTAAGTTGATAAAAAGGATTCGTCTACTGTGTTTTGAGAAAATAATTCACATGGAAATAGGCTGGTTTGACAAAGCTGAGAATTCAAGTGGAGCACTTGGGGCAAGACTTGCTCTTGATGCTGCTTCTATTCGAGCTGTGGTCGGGGATGCACTTGGTTTACTGATTCAAGATATTTCTACAGCAATCTCAGCCTTGGTAATTGGATTTGAGACAAGCTGGCATCTTTCATTGATCATTGTTGCTATGTTACCTTTACTGGTAGTAGTAAATTCTCAGGTGCATACTAGATCCATCCGAGGATTCAGCGCAGATGCCAAGAAACAATATGAGGAAGCAAGTCAAGTTGCAAATGATGCAGTAGGGAGTATTAGAACAGTGGCTGCCTTCTGTGCTGAAGAGAAGGTGATGGAGCTATATCATAAGAAATGTGAAGGACCAATAAAAGCAGGTGTAAGGCAAGGATTAATCAGCGGGACTGGCTTAGCTGTATCTTTCCTTGTCTTGTATTCTGTCTATGGATGCAGCTTTTATGCTGGCGCTCGACTTGTTCAAGATGGCAAAATATCAATCTCACATGTTTTTCGTGTCTTCTTTGTTCTCACTATGGCAGCTGTGGCACTATCTCAGTCTGGTTTAATGGCCCCAAGTGCTAGCAAAGCAGCAGCTTCTGTTGCTTCTATATTTGATATTCTTGATCAGAAATCAAAAATAGACCCCAGTGATGCCTCTGGATTGACTTTGCAAGATTTGAAGGGAGAAGTTGAGTTTCGTCATGTTGCTTTCAAGTACCCCATCAGGCCTGATGTTCAGATATTCCGAGATCTTTGCTTGACCATTCGTTCAGGAAAGACTGTTGCACTAGTGGGAGAAAGTGGAAGTGGAAAGTCGACTGTGATCTCATTGCTACAAAGATTCTATGACCCAAACTCTGGTCACATTACATTAGATGGAATAGAAATTCAAAAGCTACAGATCAAATGGTTAAGACAACAAATGGGTTTAGTAAGCCAGGAGCCTATGTTGTTTAATGACACCATCCGAGCTAATATAGCATATGGAAAGGAAGGAGATGCAACAGTAGCAGAAATTATAGCTGCCGCAGAACTGGCAAATGCTCACAAATTCATTAGCGGCTTGCATCAGGGGTATGACACAATTGTGGGGGAGCGAGGAGTTCAGTTATCTGGGGGACAAAAGCAACGAGTGGCAATTGCAAGAGCCATAGTGAAGAATCCTAGGATATTACTACTGGATGAAGCCACTAGTGCACTTGATGCTGAATCTGAGAAAGTGGTTCAAGATGCACTAGATCGTGTGATAGTGGATAGAACCACAATTATTGTGGCTCATAGGTTGTCCACAGTTAAGAACGCAGATTCAATTGCATTGCTTCAAAATGGGGTCATTGCAGAGAAGGGAAACCATAAAACTTTGCTCAAAAAGGGCGGAGCCTATGCTTCCTTACACGCATTGCACAAAAGTACTTATTCATCATAA 3918 0.4186 MSCYWIEIERSHWREMSRDTRLHGEIMTSNATESSASHLPTEEPETIQTSIDWQKKDSKKIKAKKESHKTVPFYKLFSYADTFDRLLMFVGTTAAIANGMTIPLLMIIFGNVIDAFGGANDSKEMVHNVSKASLDFVYLAMGTFVFSFLQVTCWMVTGERQSARIRSLYLEAILRQEVSFFDRETNSGEVITRMSGDTVLIQDAMGEKVGKLIQHVATFVGGVVISFSKGWLFTLVLLSYLPLFLLSGALMSLVAAKMASRGQAAYCTAANVVEQTISSIRTVASFTGEKHAISQYDKSLIKAYRAGVVEGAASGCGFGSARMFIFSSYALAAWYGGKMVLEKGYTAGQVMSIFFTISTCSLSLGQSSPNLISFAGGQAAAFKMFETIKRKPEIDAYDTSGKKLDDLNGDIELKEVCFSYPTRPNELIFNEFSISIPSGTTTALVGQSGSGKSTVISLIERFYDPQSGEVLIDNINLREFNLKWIRGKIGLVSQEPILFSCNIKENIAYGRDGATDEEIRAAAELANATKFIDKFPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESERGVQEALDRIMISRTTVIVAHRLTTIRNADIIAVIHQGKIVEKGSHAELTEDPNGSYSQLIRLQETKREQELSSANYQDKPESFQDSERQSSQRFSFLRSTSQGSSGKGNSSRHSFSSLTSAAAGDSDAASHIPAKVSLLRLAHLNKPEFPVLLLGTLAAALNGAVLPILGLLLSGMIHTLFEPADKLRKDSKFWAYVFVALAVAAFLVNSIRSYFLGVAGCKLIKRIRLLCFEKIIHMEIGWFDKAENSSGALGARLALDAASIRAVVGDALGLLIQDISTAISALVIGFETSWHLSLIIVAMLPLLVVVNSQVHTRSIRGFSADAKKQYEEASQVANDAVGSIRTVAAFCAEEKVMELYHKKCEGPIKAGVRQGLISGTGLAVSFLVLYSVYGCSFYAGARLVQDGKISISHVFRVFFVLTMAAVALSQSGLMAPSASKAAASVASIFDILDQKSKIDPSDASGLTLQDLKGEVEFRHVAFKYPIRPDVQIFRDLCLTIRSGKTVALVGESGSGKSTVISLLQRFYDPNSGHITLDGIEIQKLQIKWLRQQMGLVSQEPMLFNDTIRANIAYGKEGDATVAEIIAAAELANAHKFISGLHQGYDTIVGERGVQLSGGQKQRVAIARAIVKNPRILLLDEATSALDAESEKVVQDALDRVIVDRTTIIVAHRLSTVKNADSIALLQNGVIAEKGNHKTLLKKGGAYASLHALHKSTYSS 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1459 1305 Gene3D - 401 650 IPR027417 -
Mibi06g1459 1305 ProSitePatterns ABC transporters family signature. 1201 1215 IPR017871 GO:0005524|GO:0016887
Mibi06g1459 1305 Gene3D - 1051 1304 IPR027417 -
Mibi06g1459 1305 FunFam ABC transporter B family member 1 401 650 - -
Mibi06g1459 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 739 1026 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1459 1305 SUPERFAMILY ABC transporter transmembrane region 726 1045 IPR036640 GO:0005524|GO:0016020
Mibi06g1459 1305 ProSitePatterns ABC transporters family signature. 550 564 IPR017871 GO:0005524|GO:0016887
Mibi06g1459 1305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 411 647 IPR003439 GO:0005524
Mibi06g1459 1305 CDD ABC_MTABC3_MDL1_MDL2 411 649 - -
Mibi06g1459 1305 FunFam ABC transporter B family member 9 75 408 - -
Mibi06g1459 1305 CDD ABC_6TM_Pgp_ABCB1_D2_like 730 1044 - -
Mibi06g1459 1305 Pfam ABC transporter transmembrane region 738 1011 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1459 1305 Pfam ABC transporter transmembrane region 88 359 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1459 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1052 1297 IPR027417 -
Mibi06g1459 1305 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 89 376 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1459 1305 Pfam ABC transporter 1081 1229 IPR003439 GO:0005524
Mibi06g1459 1305 FunFam ABC transporter B family member 1 1051 1300 - -
Mibi06g1459 1305 CDD ABC_6TM_Pgp_ABCB1_D1_like 88 384 - -
Mibi06g1459 1305 MobiDBLite consensus disorder prediction 673 702 - -
Mibi06g1459 1305 PANTHER ABC TRANSPORTER B FAMILY 54 789 - -
Mibi06g1459 1305 MobiDBLite consensus disorder prediction 655 702 - -
Mibi06g1459 1305 CDD ABC_MTABC3_MDL1_MDL2 1061 1296 - -
Mibi06g1459 1305 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 403 649 IPR027417 -
Mibi06g1459 1305 SMART AAA_5 438 631 IPR003593 -
Mibi06g1459 1305 SMART AAA_5 1088 1290 IPR003593 -
Mibi06g1459 1305 FunFam ABC transporter B family member 1 719 1027 - -
Mibi06g1459 1305 Gene3D ABC transporter type 1, transmembrane domain 75 1030 IPR036640 GO:0005524|GO:0016020
Mibi06g1459 1305 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1061 1298 IPR003439 GO:0005524
Mibi06g1459 1305 Pfam ABC transporter 430 578 IPR003439 GO:0005524
Mibi06g1459 1305 SUPERFAMILY ABC transporter transmembrane region 75 395 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1459 Mibi-ChrMibi06 34974831 34979930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1459 62 1304 Calmodulin-binding Proteins AT2G36910 43.695 0.0 1026