Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1451 ATGAGTTGGGGTTCAGATGGCAAGACCGATGCCCCAAAGAAGAAGAAAAGTAACGGGTCTATTCGATCCATTTTCATGCACGCCGATTCCCAAGATTGGTTTTTGATGATTCTTGGTGTTTTGGGGTCTTTCGGTGACGGCTTCACGGGGCCTATTGTATTGTTTATCAGTAGCCGCTTGATGAACAATATAGGAAAAGCCTCATCTCGGATGAATGTTTCTGCTTTTGTTCATAACTCTAATGAGAATGCGGTTGCTCTATTATATTTGGCATGTGGGTCATTTTTAGCATGCTTCCTCGGTGAAGGAATTAATCCTGATTCTGTTTTCTCTTATTGGCTTTTGGGAATTCAACACACAGAGGGGTATTGTTGGACTAGAACTGGAGAGAGACAAGCAGCGAGAATGAGATCCAGGTATTTGAGAGCAATGCTAAGGCAAGAAGTTGCATACTTTGATTTGCAAGTCACAAGCACGTCCGAGGTCATCACCAGCATCTCTAACGATAGCATAGTAATCCAAGATTTTCTCAGCGAAAAGGTTCCAAATTTGCTGACGAATCTCTCAATGTTCGTTGCGAGCTACGTTGTGGCATTTTCAATGTTCTGGAGATTGGCCATTGTGGCCTTACCATTCGTGGTTCTTCTAGTAATCCCAGGTTTAATGTACGGAAGGACATTAACAGGGTTGGCTAGCAAAATCAGGGAAGAGTATAACCAAGCAGGTTCAATAGCAGAGCAAGCAATATCTTCCATCAGAACGGTCCATTCTTTTGTGGGAGAAACCAAAACCATATCTGCTTTCTCCTCTGCTTTACAGGGTTCGGTAAAGCTTGGTCTGAAACAGGGCCTAGCCAAAGGCTTAGCAATTGGAAGCAACAGTATCGTCTTCGCCATTTGGTCCTTCATTTGCTATTATGGTAGCAGACTCGTCATGTACCACGGCGCTCATGGTGGCACCGTCTTCGCCGTCGGAGCAGCCATGGCTCTCGGTGGATTATCACTGGGAGCTGGACTATCCAACGTGAAGTATCTATCGGAGGCAAGTTCAGCAGGGGAAAGAATAATGGAGGTGATAAAGAGAATTCCCATGATTGATTCAGAGAACATGGGAGGTGAGATTCTAGGAAGAATTCATGGGGAAGTGGAATTCGATCAGGTAGATTTCGCATACCCATCGAGGCCAGACACCATCATACTGAAAGATTTCAGTGTGAAGATTCCGGCGGGGAAGACGGCGGCGCTGGTGGGTCGAAGTGGGTCAGGGAAGTCGACGGTGATATCACTAATACAGAGGTTTTATGATCCAATGGGAGGGGAAATACGTGTGGATGGGGTGGGAATTAAGAGGTTGCAATTAAAGTGGATGAGGTCACAAATGGGATTGGTGAGCCAAGAACCTGCTCTGTTTGGGACAAGCATTAAAGAGAATATAGTGTTTGGGAAAGAGGATGCTAGTGAGGATGAGATTGTGGAAGCTGCTAAGGCTTCCAATGCTCATGATTTCATTTCTCAGTTGCCTTTGGGATACGATACACAGGTGGGTGAACGAGGCATTCAAATGTCAGGAGGACAAAAACAGAGGATTGCCATTGCACGAGCACTAATAAAAAAACCACAAATCCTCCTACTTGATGAAGCAACAAGTGCTCTAGACTCTGAATCCGAACGAGTTGTCCAAGAAGCTCTAGACAATGCAGCTATTGGACGAACCACCATTATCATCGCTCACCGCCTCTCCACCATTCGAAACGCCGATGTTATCACTGTCCTCCAAAATGGTAGCCTCATAGAAATGGGATCCCATGATGAACTCATCAAAAACGAAAATGGTCTTTACACCTCTCTGGTTCGTCTTCACCAAATAGAGAAAACTAGAACAACTCAAGAAGATGTCATTGGCGTCACCTCTATATCTTCCATTGTATCAGATAGGGACATGAACAACACTAGCTTTAGAGGATTATCTCGTGTGACCCGTTCTAATTCTGCAAATTCAATAGGACAGAGTCGAGTTTCTAGTGCTGATAAAGAAATGAACATGGTTACAGAGGAAAAGAAACTCCTCGTTCCTTCGTTTCGGAGGTTGCTTGCCTTGAATCTCCCAGAATGGAAGCATGCAACTTTAGGATGTTTTAGTGCATTTCTGTTCGGTGCAATTTACCCATTGTTCTCATTCTCAATGGGCTCCATGGTTTCTACGTTTTTTCTGACAGACCATGACGAGATTAAAAGGAAGATGAAGGTTTATGCGTTTTGTTACCTGGGCTTATTGGCGTCATCATTGAGTACAAGCATAAGCCAGCATTATAGTTTCGCTTACATGGGTGAATACTTGACTAAAAGGATTAGAGAGAAAACGTTTTCAAAGATTCTCACATTTGAAGTTGGCTGGTTCGATCAGCCTGAAAATACAAGTGGTGCAGTTTGCTCTAGACTTTCCAAAGATGCCAATGTGGTGAGGTCCCTAATAGGAGATAGAATGTCTCTGTTGATACAAACTTTCTCCACAGTGATAATTGCTTGCACGATGAGCCTAGTGCTTTCGTGGAGGTTTGCCATTGTTATTATCGCTGTTCAACCTCTTACTGTGATAAGCTACTACACTAGGAAGGTCCTACTCAAGAGCATGATCAACAAGGCCACTAAAGCTCAAGATGAATGCAGCAAGCTAGCCGCAGAAGCTGTTTCCAACCTTCGTATGGTTACAGCCTTCTCCTCCCAGGACCGAATCCTCAAAATGCTCGAAAAAGCCCAAGAAGGCCCAAGAAAAGAGAGCATTAGGCAGTCTTGGTTTGCTGGTATTGGGCTTGCTTTCTCACAGAGTGTAACAGCTTGTACTTGGGCTTTAGACTTTTGGTATGGTGGGAAGTTAATGTCCTGTGGTCTTATCAAAGCCGACGCACTATTTCAAACATTCATGGTGCTAATGGGAACAAGTAGGGTCATTGCAGATGCAGGAAGCATGACTTCTGATCTTGCCAAAGGTGCAGATTCTGTGGGCTCCCTTTTCGCAGTTCTCGACCGCCATACAAAAATCGACCCCGATAACCAAAACGGGCTCAAGCCCGATAAACTCACAGGCCTAATAGAACTTCGTGATATCCATTTCGCGTACTCGGCCCGGCCCAACTACATGATCTTTCAAGGGTTCTCAATGAGAATGGAAGCAGGTAGATCAACAGCATTGGTAGGCCAAAGTGGGTCTGGAAAGTCAACCATCATAGGATTAATTGAGAGATTCTACGACCCACTAAAAGGGATAGTGAGTATAGACGGGAGAGACATAAAGTCATACCACCTTAGGACCTTGAGAGAACACATAGCATTGGTCAGCCAAGAGCCAACATTATTTGCAGGGAGCATAAAGGAGAATATTGCATACGGAGCTAGAGACAAAGTCGACGAAGCGGAGATAATTGAGGCAGCTAAGGTTGCAAATGCTCATGAATTCATATCAAGCTTGAGGGATGGATATGAGACATGGTGTGGGGAGAGAGGGGTACAATTATCAGGTGGTCAAAAGCAAAGAATAGCAATAGCAAGAGCAATAGTGAAGAAGCCTAAGGTGTTGTTACTAGACGAGGCGACAAGTGCTTTAGATAACCAGTCAGAGAGGGCAGTGCAAGAAGCTTTGGATCGAGTTATGGTGGGGAGGACAAGTGTGGTAGTGGCTCATAGGTTGAGCACCATTCATAAGTGTGATGTGATTGCTGTGTTGGAGAAGGGAGATGTGGTGGAGAAAGGGACTCACTCGTCTTTGTTGGCAAAGGGACCCGGTGGTGCTTATTATGCTTTGGTTGGTCTCCAAAGGAGGCATTCCCAAATCCATTAA 3834 0.4476 MSWGSDGKTDAPKKKKSNGSIRSIFMHADSQDWFLMILGVLGSFGDGFTGPIVLFISSRLMNNIGKASSRMNVSAFVHNSNENAVALLYLACGSFLACFLGEGINPDSVFSYWLLGIQHTEGYCWTRTGERQAARMRSRYLRAMLRQEVAYFDLQVTSTSEVITSISNDSIVIQDFLSEKVPNLLTNLSMFVASYVVAFSMFWRLAIVALPFVVLLVIPGLMYGRTLTGLASKIREEYNQAGSIAEQAISSIRTVHSFVGETKTISAFSSALQGSVKLGLKQGLAKGLAIGSNSIVFAIWSFICYYGSRLVMYHGAHGGTVFAVGAAMALGGLSLGAGLSNVKYLSEASSAGERIMEVIKRIPMIDSENMGGEILGRIHGEVEFDQVDFAYPSRPDTIILKDFSVKIPAGKTAALVGRSGSGKSTVISLIQRFYDPMGGEIRVDGVGIKRLQLKWMRSQMGLVSQEPALFGTSIKENIVFGKEDASEDEIVEAAKASNAHDFISQLPLGYDTQVGERGIQMSGGQKQRIAIARALIKKPQILLLDEATSALDSESERVVQEALDNAAIGRTTIIIAHRLSTIRNADVITVLQNGSLIEMGSHDELIKNENGLYTSLVRLHQIEKTRTTQEDVIGVTSISSIVSDRDMNNTSFRGLSRVTRSNSANSIGQSRVSSADKEMNMVTEEKKLLVPSFRRLLALNLPEWKHATLGCFSAFLFGAIYPLFSFSMGSMVSTFFLTDHDEIKRKMKVYAFCYLGLLASSLSTSISQHYSFAYMGEYLTKRIREKTFSKILTFEVGWFDQPENTSGAVCSRLSKDANVVRSLIGDRMSLLIQTFSTVIIACTMSLVLSWRFAIVIIAVQPLTVISYYTRKVLLKSMINKATKAQDECSKLAAEAVSNLRMVTAFSSQDRILKMLEKAQEGPRKESIRQSWFAGIGLAFSQSVTACTWALDFWYGGKLMSCGLIKADALFQTFMVLMGTSRVIADAGSMTSDLAKGADSVGSLFAVLDRHTKIDPDNQNGLKPDKLTGLIELRDIHFAYSARPNYMIFQGFSMRMEAGRSTALVGQSGSGKSTIIGLIERFYDPLKGIVSIDGRDIKSYHLRTLREHIALVSQEPTLFAGSIKENIAYGARDKVDEAEIIEAAKVANAHEFISSLRDGYETWCGERGVQLSGGQKQRIAIARAIVKKPKVLLLDEATSALDNQSERAVQEALDRVMVGRTSVVVAHRLSTIHKCDVIAVLEKGDVVEKGTHSSLLAKGPGGAYYALVGLQRRHSQIH 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1451 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 376 620 IPR027417 -
Mibi06g1451 1277 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1030 1267 IPR003439 GO:0005524
Mibi06g1451 1277 FunFam Putative ABC transporter B family member 8 673 1018 - -
Mibi06g1451 1277 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 382 618 IPR003439 GO:0005524
Mibi06g1451 1277 SMART AAA_5 1057 1244 IPR003593 -
Mibi06g1451 1277 SMART AAA_5 409 595 IPR003593 -
Mibi06g1451 1277 Gene3D - 1020 1276 IPR027417 -
Mibi06g1451 1277 CDD ABC_6TM_Pgp_ABCB1_D2_like 697 1013 - -
Mibi06g1451 1277 CDD ABC_6TM_Pgp_ABCB1_D1_like 36 355 - -
Mibi06g1451 1277 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1020 1270 IPR027417 -
Mibi06g1451 1277 ProSitePatterns ABC transporters family signature. 521 535 IPR017871 GO:0005524|GO:0016887
Mibi06g1451 1277 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 117 347 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1451 1277 Pfam ABC transporter 400 549 IPR003439 GO:0005524
Mibi06g1451 1277 CDD ABC_MTABC3_MDL1_MDL2 382 619 - -
Mibi06g1451 1277 Gene3D - 372 621 IPR027417 -
Mibi06g1451 1277 SUPERFAMILY ABC transporter transmembrane region 25 363 IPR036640 GO:0005524|GO:0016020
Mibi06g1451 1277 Pfam ABC transporter transmembrane region 709 977 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1451 1277 Pfam ABC transporter transmembrane region 122 322 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1451 1277 FunFam ABC transporter B family member 4 372 628 - -
Mibi06g1451 1277 Gene3D ABC transporter type 1, transmembrane domain 24 624 IPR036640 GO:0005524|GO:0016020
Mibi06g1451 1277 Coils Coil 874 894 - -
Mibi06g1451 1277 CDD ABC_MTABC3_MDL1_MDL2 1030 1270 - -
Mibi06g1451 1277 Pfam ABC transporter 1049 1198 IPR003439 GO:0005524
Mibi06g1451 1277 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 709 995 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi06g1451 1277 PANTHER ABC TRANSPORTER B FAMILY 8 720 - -
Mibi06g1451 1277 SUPERFAMILY ABC transporter transmembrane region 694 1009 IPR036640 GO:0005524|GO:0016020
Mibi06g1451 1277 FunFam ABC transporter B family member 1 23 375 - -
Mibi06g1451 1277 ProSitePatterns ABC transporters family signature. 1170 1184 IPR017871 GO:0005524|GO:0016887
Mibi06g1451 1277 FunFam ABC transporter B family member 4 1020 1275 - -
Mibi06g1451 1277 Gene3D ABC transporter type 1, transmembrane domain 656 1018 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1451 Mibi-ChrMibi06 34914707 34920679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1451 10 1276 Calmodulin-binding Proteins AT2G36910 43.916 0.0 1041