Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1446 ATGGCAAGTGATTCGCTGAAACCCATGAATTGCTTGCTGTTACTGCTCTGTAGTTCGGCATTTGTATGGCGTTTTGCTGCCTCGCAGGTTGAAGATGACGTGCAATGCCTTAAAGGGATCAAAACCTCTTTCAATGATCCTCAGGGAAAGCTTGCTTCTTGGCGTTTTAATAACAGCACCGCCGGTTTCATATGCACGTTCGTGGGTGTCACGTGCTGGAATCCTCAGGAGAATCGGGTCCTCAATTTGGAGCTCCGGGATATGAGGCTCTCGGGTCAGATGCCAGAATCCTTGAAGTATTGCGGTAGGAGTTTGCAAAAATTGGATCTTGGGTCCAACGATGTTTCTGGTACGATCCCTTCTCAGATATGTGATTGGTTGCCATTTTTAGTTACATTGGACTTGTCTGATAATCATCTCACTGGGCAAATACCACCTACTCTTGTGAATTGTACTTACTTGAATACCCTGATTCTTTCCGATAATCAACTTTCGGGTTCTGTTCCTTTTGAATTTGGGAGTTTGGCTAGGCTTAGGACGTTTTCTGTTGCTAATAATCGTCTTACTGGTACGATTCCTTCGTATTTGAGTGGTTATGACAAGGAAGATTTTGCTGGGAATAGTGGACTTTGTGGGGGTCCACTTGGATCAAAGTGTAGTGGTTTGAGTAAGAAGAATCTTGCTATTATCATCGCTGCTGGGGTCTTTGGTGCTGCTGCTTCTTTATTTTTGGCTTTTGGATTGTGGTGGTGGTATCATTTGCGGTTGGCTAGGAAGAAGAGAGGATTTGGGGATGGAATGGGTGATGATTGGGCTGCGAAGTTGAGGTGTCACAGACTTGTTCAAGTTACATTGTTTCAGAAACCCCTTGTGAAGGTTAAACTAGGAGATTTGATGGCAGCTACGAACAATTTCAATTCTAAAAATTTAATCCTGTCTTCAAGAACAGGGACCACCTATAAAGCAGACCTTCCTGATGGCTCAACACTTGCAGTCAAGAGGCTTAACACCTGTAAGATTGGAGAAAAGCAATTTCGCATGGAGATGAGTAGGCTTGGGCAAGTCAGGCATCCGAATTTGGCGCCCCTTTTAGGTTTCTGTGTGGTTGAAGAGGAAAAACTTCTGGTTTATAAGCACATGTCAAATGGTACTCTATCTTCTTTGTTGCATGAGCATGGTACTGGATCAGAATTGGATTGGCCAATGAGATTCAGGATAGGCTTTGGCGCTGCTAGGGGTCTTGCTTATCTGCATCATGGGTGCAATCCTCCAATAAGACACCAAAACATCTGTTCCAATGTGATAGTTGTTGATGAAGATTTTGATGCTCGATTAATGGACTTTGGACTTGCTAGGCTTGTGACATCTGATTCTAATGATAGTAGCTTTGTGAGTGGGGACTTGGGGGAACTTGGCTATGTAGCTCCAGAATATCCAAGCACTCTTGTTGCTTCTCTAAAAGGGGATGTGTATGGATTTGGAGTTGTGCTTTTGGAGTTGGTTACCAGTCGAAAACCTCTTGAAGTTGGCAATGGAGAGGAAGAGTTTAAGGGTAACTTAGTTGATTGGGTAAGTATGCTTTCTAGTTCTGGTCGAATTAAGGATTGCATTGATAGGGCCGTATGTGGAAGAGAGCATGACGAGGAGATTTTGCAGCTTCTGAAAATTGCATGTAATTGTGTGGTTTCTCGGCCCAAGGACAGGTGGTCCATGTACCAGGTATATCATTCCTTGAAGGGTTTGTCCAAAAACTACAATTTCTCTGAACATGATGATGAATTTCCATTGATTTTTAATAAGCCAGAGTCGGCCTAA 1815 0.4342 MASDSLKPMNCLLLLLCSSAFVWRFAASQVEDDVQCLKGIKTSFNDPQGKLASWRFNNSTAGFICTFVGVTCWNPQENRVLNLELRDMRLSGQMPESLKYCGRSLQKLDLGSNDVSGTIPSQICDWLPFLVTLDLSDNHLTGQIPPTLVNCTYLNTLILSDNQLSGSVPFEFGSLARLRTFSVANNRLTGTIPSYLSGYDKEDFAGNSGLCGGPLGSKCSGLSKKNLAIIIAAGVFGAAASLFLAFGLWWWYHLRLARKKRGFGDGMGDDWAAKLRCHRLVQVTLFQKPLVKVKLGDLMAATNNFNSKNLILSSRTGTTYKADLPDGSTLAVKRLNTCKIGEKQFRMEMSRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLSSLLHEHGTGSELDWPMRFRIGFGAARGLAYLHHGCNPPIRHQNICSNVIVVDEDFDARLMDFGLARLVTSDSNDSSFVSGDLGELGYVAPEYPSTLVASLKGDVYGFGVVLLELVTSRKPLEVGNGEEEFKGNLVDWVSMLSSSGRIKDCIDRAVCGREHDEEILQLLKIACNCVVSRPKDRWSMYQVYHSLKGLSKNYNFSEHDDEFPLIFNKPESA 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1446 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 220 - -
Mibi06g1446 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 380 600 - -
Mibi06g1446 604 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Mibi06g1446 604 Gene3D Phosphorylase Kinase; domain 1 265 379 - -
Mibi06g1446 604 SUPERFAMILY Protein kinase-like (PK-like) 283 578 IPR011009 -
Mibi06g1446 604 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1446 604 Gene3D Transferase(Phosphotransferase) domain 1 380 600 - -
Mibi06g1446 604 SUPERFAMILY L domain-like 29 201 - -
Mibi06g1446 604 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 379 - -
Mibi06g1446 604 Pfam Leucine Rich Repeat 130 151 IPR001611 GO:0005515
Mibi06g1446 604 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 83 580 - -
Mibi06g1446 604 Pfam Protein tyrosine and serine/threonine kinase 326 576 IPR001245 GO:0004672|GO:0006468
Mibi06g1446 604 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Mibi06g1446 604 CDD STKc_IRAK 313 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1446 Mibi-ChrMibi06 34859186 34861000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1446 11 603 Receptor kinase-like Gene Family AT3G28450 63.773 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Mibi06g1446 PK_Tyr_Ser-Thr 7.4e-27 CL0016