Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1440 ATGGACGAGCTACTTGGTAATAATGCCGATAATATCAATTCTGATTCTTTCGTTCCATCCCTTCAAGATCCCAGCTTTAGCAAGATGAGCAATAATAGCAATAATGTTGAGTCTCAAAGCAGCACCGAATCCAACAGTTATGATGAAAGTCACAAGAGCAGCTCAAGCTGTGTGAGTAATTACTCCAACACTTGTGAAGCCAATGATTCAAATTCAAGTCTTAGTAGAAGGTTTTGCCCTTGTAAGCCTCACAAGGGCAATGATATTCGATGGGATGCTATACAGTTCGTGAAAGCTAAGTATGGAGATTTGGGTTTGGGGCATTTCAGGCTGTTGAAGAAGCTGGGTTTTGGGGACATTGGAAGTGTGTATCTTGCTGAGCTTAAGGGAAAAGGCAGTCTCTTTGCAATGAAAGTCATGGATAAAGAAAAGTTGACTGCAAGGAAGAAAATGTCCAGAGTCCAGACTGAGAGGGACATTTTGAGTTCCCTGGACCACCCTTTCCTTCCCACCCTTTACTCTCATTTCCAAACAGAGAAATTCTCTTGCTTGCTTATGGAGTTTTGTAATGGTGGTGATCTCCATGTCCTACGCCAGCGCCAGCCAGGCAAGCTTTTCACAGAGCAGGCTGCAAGGTTTTACGCTTCTGAAATTCTTCTTGCTCTTGAGTATCTCCACATGATGGGGGTGGTATATAGGGACTTGAAGCCTGAGAATGTTTTGGTTCGGGAAGATGGTCATATCATGATTTCTGATTTTGATCTATCATTAAAATGTTGTGTGAGACCTACCCTTGTTCAGTCCAATAATGAAGAACCTTCTAGTCAAGTTTCTTCCTTTTGTATTGAGCCATCTTGCAAGCTACCTGTTTGTGTGGAGCCTTCGTGCTTGCAATTGCAATTGAAGCCTTCTTCTTGCTTCAAACCCCAAGTTTTCAATCCCAAAAAGGCCAAATCAAAGAGTGTTAAACAGAATTCAACAAACCCTGATTCATATCCTATGCTTATTGCTGAGCCAACCAATGCTCGCTCTATGTCTTTTGTTGGGACTCATGAATATCTAGCCCCAGAGATTATTAGAGGAGATGGTCATGGTAGTGCTGTGGATTGGTGGACTTTTGGTATATTCTTGTATGAGTTGTTGCATGGGAAGACACCATTTAAGGGAAATGGAAACAGAGAGACACTGTTCAACGTTGTTGGGAAGCCTCTTATGTTTCCTGAGGGATCAAACATTAGTTTTGCTGCTAAGGATTTGATAAGGGGATTGCTTGTGAAAGACCCAAAGAAGAGGCTTGGGTTTCAGAGAGGAGCTTCTGAGATCAAACAACATCCTTTCTTTCAAAGTGTTAATTGGGCTCTGGTTCGTAGTAACCAACCCCCACTGATCCCAAAACCACTTGATCTTTCAGTTTTGAATGAGACTTTGAAGCAGTCAGTGCCTGTTAATGACAAAGGAAGTTCTGATAATTCCAACAGATCTTCAGGTCCTTACTTGGAATTTGAATTTTTTTGA 1515 0.4185 MDELLGNNADNINSDSFVPSLQDPSFSKMSNNSNNVESQSSTESNSYDESHKSSSSCVSNYSNTCEANDSNSSLSRRFCPCKPHKGNDIRWDAIQFVKAKYGDLGLGHFRLLKKLGFGDIGSVYLAELKGKGSLFAMKVMDKEKLTARKKMSRVQTERDILSSLDHPFLPTLYSHFQTEKFSCLLMEFCNGGDLHVLRQRQPGKLFTEQAARFYASEILLALEYLHMMGVVYRDLKPENVLVREDGHIMISDFDLSLKCCVRPTLVQSNNEEPSSQVSSFCIEPSCKLPVCVEPSCLQLQLKPSSCFKPQVFNPKKAKSKSVKQNSTNPDSYPMLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGKTPFKGNGNRETLFNVVGKPLMFPEGSNISFAAKDLIRGLLVKDPKKRLGFQRGASEIKQHPFFQSVNWALVRSNQPPLIPKPLDLSVLNETLKQSVPVNDKGSSDNSNRSSGPYLEFEFF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1440 504 ProSiteProfiles Protein kinase domain profile. 109 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1440 504 MobiDBLite consensus disorder prediction 7 49 - -
Mibi06g1440 504 Pfam Protein kinase domain 110 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1440 504 Pfam Protein kinase domain 344 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1440 504 PANTHER FLIPPASE KINASE 1-RELATED 29 469 - -
Mibi06g1440 504 SMART serkin_6 109 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi06g1440 504 Gene3D Transferase(Phosphotransferase) domain 1 342 465 - -
Mibi06g1440 504 FunFam serine/threonine-protein kinase D6PK-like 193 260 - -
Mibi06g1440 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Mibi06g1440 504 CDD STKc_phototropin_like 108 468 - -
Mibi06g1440 504 MobiDBLite consensus disorder prediction 1 49 - -
Mibi06g1440 504 Gene3D Transferase(Phosphotransferase) domain 1 189 258 - -
Mibi06g1440 504 FunFam Serine/threonine-protein kinase D6PK-like 107 192 - -
Mibi06g1440 504 SUPERFAMILY Protein kinase-like (PK-like) 89 474 IPR011009 -
Mibi06g1440 504 FunFam serine/threonine-protein kinase D6PK-like 342 465 - -
Mibi06g1440 504 Gene3D Phosphorylase Kinase; domain 1 108 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1440 Mibi-ChrMibi06 34810734 34812336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1440 1 504 AGC Kinase Gene Family AT5G40030 66.601 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mibi06g1440 Pkinase 4.7e-39 CL0016