Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1421 ATGGAAATGATAATACTTAATGCAGAGAGCATAGGAAAAAGTAGGATGTACATGGAAGGATGTGACTTCCAAAGAAATAGAGGTGTCAAGAGGCAAAGAGGAAAGCGAGGAGCAGCTGCACTTAACTATGATGATAATCTAAGTCAGAAGAGACAGCAAGTTGATCGAAGTTGTACCACCCATACTGTGAAGAGAAGTTCAAGTTTTCGAGGCGTCAGCAGACACAAATGGACCGGTCGGTATGAGGCTCACCTGTGGGACAAGCTCTCTTGGAATGTAACACAGAAAAAGAAAGGGAAGCAAGGAGCTTATGATGAAGAAGAATCTGCAGCCAGAGCATACGATTTAGCTGCACTGAAATACTGGGGAACATCAACTTTCACCAATTTTCCGATATCAGATTACATGAAAGACATAGAAATAATGCAGACTATGACAAAAGAGGAGTATTTGGCCACTTTAAGAAGAAAAAGTAGTGGCTTCTCAAGAGGCGTGTCAAAGTATAGGGGTGTTGCAAGGCACCACCACAATGGTAGATGGGAAGCAAGGATAGGGAGGGTTTTTGGAAACAAATATCTCTACCTTGGTACTTACAGCACCCAGGAGGAAGCTGCTCGTGCTTATGACATTGCAGCCATTGAGCACAGAGGGATTCATGCTATAACCAATTTTGATTTGAGCAATTACTTAAGACAGTTAAGACCTGCCAGAGGAAATATCCAAGAAGCAATTATAGAATCACAGATCATACCAGAGGTTCAGACAATGGCATACCCTTTTCATTATACTTCAACAGAAGAGTCCAAAACCTTGGCCCTTGACAGCAATTTTTTCAACACAGATTACCTGAAGCCTTCACAAAATCAAGAGATCCTTGAGAAGGAAACTGCTTTTATCTCAAGCAGTAAGTCATCTTCACCAACTGCTCTAGGCCTTCTTCTCCGTTCTTCAATATTCAGGGAATTAGTGGAAAAGAATTTGAACATGTTTGGAGATGAAGTTGATGGAGAAGACGCAAAGGATCAAGAACCGCATATATCAAGTGATGATGAGTTGAGTAGAATATTCTATGATAGTGTTGATGATATCCCATTTGTCAATGATCCTAAAAGTTACAATTTTTCAAGAGAGCTTCATTCCATTCTATGA 1149 0.4056 MEMIILNAESIGKSRMYMEGCDFQRNRGVKRQRGKRGAAALNYDDNLSQKRQQVDRSCTTHTVKRSSSFRGVSRHKWTGRYEAHLWDKLSWNVTQKKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFPISDYMKDIEIMQTMTKEEYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEHRGIHAITNFDLSNYLRQLRPARGNIQEAIIESQIIPEVQTMAYPFHYTSTEESKTLALDSNFFNTDYLKPSQNQEILEKETAFISSSKSSSPTALGLLLRSSIFRELVEKNLNMFGDEVDGEDAKDQEPHISSDDELSRIFYDSVDDIPFVNDPKSYNFSRELHSIL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1421 382 FunFam AP2-like ethylene-responsive transcription factor 166 227 - -
Mibi06g1421 382 Pfam AP2 domain 68 123 IPR001471 GO:0003700|GO:0006355
Mibi06g1421 382 Pfam AP2 domain 166 215 IPR001471 GO:0003700|GO:0006355
Mibi06g1421 382 ProSiteProfiles AP2/ERF domain profile. 68 131 IPR001471 GO:0003700|GO:0006355
Mibi06g1421 382 CDD AP2 67 133 IPR001471 GO:0003700|GO:0006355
Mibi06g1421 382 CDD AP2 166 227 IPR001471 GO:0003700|GO:0006355
Mibi06g1421 382 Gene3D AP2/ERF domain 166 227 IPR036955 GO:0003700|GO:0006355
Mibi06g1421 382 Gene3D AP2/ERF domain 68 133 IPR036955 GO:0003700|GO:0006355
Mibi06g1421 382 SUPERFAMILY DNA-binding domain 67 133 IPR016177 GO:0003677
Mibi06g1421 382 ProSiteProfiles AP2/ERF domain profile. 167 225 IPR001471 GO:0003700|GO:0006355
Mibi06g1421 382 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 45 245 - -
Mibi06g1421 382 SUPERFAMILY DNA-binding domain 166 227 IPR016177 GO:0003677
Mibi06g1421 382 SMART rav1_2 167 231 IPR001471 GO:0003700|GO:0006355
Mibi06g1421 382 SMART rav1_2 68 137 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1421 Mibi-ChrMibi06 34602296 34604340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1421 145 233 AP2-EREBP Transcription Factor Family AT5G57390 36.082 1.98e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi06g1421 AP2 4.9e-10 CL0081