Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi06g1417 ATGTCAGTGGAGACCACGGCAAAAATAATGTCTAGTGCTCGTGATCTAGAGACTGGAAAGAAGAGAACAATTTCCATTTGCCTTGAAGAAGATTTCTGTGTTCACCCAGAGAATGAAGAACTGAACTCTGGTAAAGAAAGTATGGGTAGGGTGAAAGAAGAAAATGAAGGAAGGTTGAAGATGATGCTGGATAGAGTGGAAAATGATTACCGGTCTCTCCAACTGCGTTTCTTTGATATCTTGCACAGAGAAGCTTCTGAAAAAGGCAAAGCAAAATCAACTAATTCCCATGATGAAACTGAAGAGCCTGAGCTCGTGTCACTTTGCCTGGGAAGAAGTCCAAAGGACCCAAAAAAAGGAACAAGAATTGGAAACACTTCTAATCCTAAAGAAAGTGGAGACCTGGATGCTTGCCTCACCCTTGGATTGGACTCCAATTGTGATTCATCAGTGGAGAATGTGTCTGATCACAGCCCAGGAAACAGCTCAGAAGAAATTAAGGAAGCAGAAATAGGAGGATCAACATGGCAATCAAATAAATCTGTCAAGCCAAAAAATGGAGAAGATGAAATTTCGGAGCAGATGCCTGCTAAGAAAGCGAGGGTTTCTGTGAGAGCAAGATGTGACACCCCCACGATGAGTGATGGGTGCCAATGGAGAAAATATGGACAGAAGATAGCCAAAGGTAATCCTTGTCCACGTGCATACTACCGCTGCACTGTTGCACCAGCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGCAGAGGACATGTCCATCTTAATCACTACATATGAAGGGACCCACAATCACCCACTTCCAGTTTCAGCTACAGCCATGGCTTCCACCACTTCAGCTGCTGCTTCCATGCTATTGTCTGGTTCTTCAACATCTCAGCCTGCAGATAAAAACGGTTTTGCATCATTCACAAATTCTGCTACACTGCTTAATTGCCCAAACCTTGGACAATTTGATCTGTCAAAAGCAAAACAGGTCTTCTTGCCCAACCCTGTCTCACCTTTGTTCCCAACAGTCACTCTAGACTTAACTTCTGCCTCATCCTCATCGACCCATCTCATTAATTATCGTCCCCCTTCAAACTTTGCTTTGAACCCAAGATTTCCTCCAACAAGTTTAAGTTTTTGTTCAAAGGAACCCAACATTCAACATGCAGTATGGGGTAATGGAGTCCTTAATAATGAGAAAACCCACATGAGGTCAGTTGACCTGGGAAATCAATTTCAACAACAGTTCCATCAAAACTGCATGCAAAACCAAGCTCCTTCACAAGAAGAGGCTTTAGCAGAAACATTAACCAAAGCAATTAGTACGGACCCAAGACTTCGATCAGTAATAGCTGCAGCAGTTTCATCTATAGTGGGTCAAGGATCCACCAATGTGAACCAGACAAGGGGAGGGGAAATTTCAGATTTCGGGTTGAACTTGAAGCTAGGAGAACATTCTCAGTTAGCTTCTTCCGATCTGTTGACACAAAATGGGAAAGGTTGCTTACCAGGTTACTTCAACAGGTTGTCATCAAATTCCTATAATGGAAACTTCATGCCTCTCCAACCTCCAGTTCCATTTTCTGTCTCTAAGAGAAGCGTGCCTCCTACCATTAGCGATCAGATCAATCATTAA 1641 0.4308 MSVETTAKIMSSARDLETGKKRTISICLEEDFCVHPENEELNSGKESMGRVKEENEGRLKMMLDRVENDYRSLQLRFFDILHREASEKGKAKSTNSHDETEEPELVSLCLGRSPKDPKKGTRIGNTSNPKESGDLDACLTLGLDSNCDSSVENVSDHSPGNSSEEIKEAEIGGSTWQSNKSVKPKNGEDEISEQMPAKKARVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTVAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPADKNGFASFTNSATLLNCPNLGQFDLSKAKQVFLPNPVSPLFPTVTLDLTSASSSSTHLINYRPPSNFALNPRFPPTSLSFCSKEPNIQHAVWGNGVLNNEKTHMRSVDLGNQFQQQFHQNCMQNQAPSQEEALAETLTKAISTDPRLRSVIAAAVSSIVGQGSTNVNQTRGGEISDFGLNLKLGEHSQLASSDLLTQNGKGCLPGYFNRLSSNSYNGNFMPLQPPVPFSVSKRSVPPTISDQINH 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi06g1417 546 Gene3D WRKY domain 197 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g1417 546 SUPERFAMILY WRKY DNA-binding domain 206 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mibi06g1417 546 MobiDBLite consensus disorder prediction 88 135 - -
Mibi06g1417 546 MobiDBLite consensus disorder prediction 150 205 - -
Mibi06g1417 546 Pfam WRKY DNA -binding domain 215 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1417 546 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 38 469 IPR044810 GO:0003700
Mibi06g1417 546 FunFam probable WRKY transcription factor 31 198 275 - -
Mibi06g1417 546 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1417 546 MobiDBLite consensus disorder prediction 88 105 - -
Mibi06g1417 546 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mibi06g1417 546 MobiDBLite consensus disorder prediction 183 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi06g1417 Mibi-ChrMibi06 34546348 34548788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi06g1417 48 511 WRKY Transcription Factor Family AT5G15130 45.382 2.29e-87 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mibi06g1417 WRKY 5.5e-24 CL0274